Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hlac_1574 |
Symbol | |
ID | 7401507 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorubrum lacusprofundi ATCC 49239 |
Kingdom | Archaea |
Replicon accession | NC_012029 |
Strand | + |
Start bp | 1591464 |
End bp | 1593086 |
Gene Length | 1623 bp |
Protein Length | 540 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 643708640 |
Product | Amidohydrolase 3 |
Protein accession | YP_002566230 |
Protein GI | 222479993 |
COG category | [R] General function prediction only |
COG ID | [COG1574] Predicted metal-dependent hydrolase with the TIM-barrel fold |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTGCCAG CCCCGGACTC GGCCATGACC GACGCCGCGG ACCGGCTGTT CGTGAACGGG GAGATACACA CGCTTGCGAC TCCCGACGAG ACCCACGAGG CCGTCGCCGT GCGGGACGGC GCGGTCGTCC GCCTCGGTCG GAGCCACGAG GTGCGGTTCC TCGAAGGCGT CGACACCGAG GTGATCGATC TCGACGGTTG CGTGCTCCTC CCCGGCTTCG TCGACGCGCA CACCCACCTG ACGACGGTCG GGCGCTACCT TGTCCACGCC GACCTCTCGG TCGCGGACTC GCCGATGGAG GCGGTCGATC TGCTTGCGGA ACGGGCGGCA GCGGTCGAGG ATGGGAACTC GGACGCGTCG GACGGCGGGT CCGACGACCC CGCAACCGAC TGGGTGCTCG GCTACGGCTA CGACGAGTCG ACGTGGGACG ACGACCGCTA CCTGACCCGC GAGGACCTCG ACCGCGTCTC GACGGAACGT CCCGTCGCGG CCGTCCGCGA GGACATGCAC GTCGCCGCGG TCAACGGGGT CGTCCTCGAC CGGTTCGCGG ACGCTCTCGA CTCGGTCCCC GACGAGACGG TGCCGACCGA CGACGCGGGC GAGCCGACGG GCGTCCTCCT AGAGAGCGCG ATCGATCCGA TCTACGAGGC GGTCGAACCG GGGCCGGCGG CGACTCGCGA CCTCGTCACC GCTGCGCTCG ACGACTGCGC CGCCAAGGGG ATCACGGGCT TTCACGACAT GGTGCGAAAC TCGCACGCTC CGCGCGTCTA CCGCGACCTC GACGCCGCCG ACGAGCTGAC CGCACGTGTC CGGATCAACT ACTGGAGCGA CCACCTCGAC GCGCTGCGGG AGGTCGGCCT GACGACGAAC GCCGGAAGCG ACATGGCCGA GACGGGCGCG ATCAAGTCGT ACACCGACGG GAGCTTCGGC GGGCGGACCG CGAGGCTCTC CGAACCGTAC GCGGACGCAC CGGGCGAGAC CGGGCAGTGG GTCGTCGACC CGGACGAACT GGCAGAGACG GTCGCGGACG CGACCGGGGC GGGCTACCAG TTCACCGCCC ACGCGATCGG CGACGAGGCG ATCGACGCCG TCCTCGACGC CTACGAGGAG GAGTCGCACA CCGACCCCGG CGCGGCGCGT CACCGGATCG AACACGTCGA ACTCGCAGAC GACGCGGCGA TCGAGCGGCT CGCGGAGACG GGCGTGGTCG CCAGCGTCCA GCCGAACTTC CTCAAGTGGG CGGGCGCAGA CGGGCTTTAC GAGGGGCGTC TCGGGCCGGA ACGCACCGCC GAGACGAACC GCTACCGCGA CATGCTCGAC GCGGGAGTTC ACCTCGCGTT TGGCTCCGAC GGAATGCCGA TGGACCCCTT ACTCGGCGTC CACCACGCCG TCAACGCGCC GGCCCCTGCC CAGCGGCTCA CGGTGACCGA GGCCCTGCGC GCGTACACCC GGGGCGCGGC GTACGCGGGC TTCGACGAGG ACCGGCTCGG CACGGTCGAG CCCGGCAAGT GCGCCGATTT CGCCGTCCTC GACGCGTCGC CGTGGGAGGA GTCGGACGCG ATCCGCGGGG TCGACGTGGC GATGACGGTC GTCGACGGCG AGGTCGTATA CGACGGGCGG TAA
|
Protein sequence | MLPAPDSAMT DAADRLFVNG EIHTLATPDE THEAVAVRDG AVVRLGRSHE VRFLEGVDTE VIDLDGCVLL PGFVDAHTHL TTVGRYLVHA DLSVADSPME AVDLLAERAA AVEDGNSDAS DGGSDDPATD WVLGYGYDES TWDDDRYLTR EDLDRVSTER PVAAVREDMH VAAVNGVVLD RFADALDSVP DETVPTDDAG EPTGVLLESA IDPIYEAVEP GPAATRDLVT AALDDCAAKG ITGFHDMVRN SHAPRVYRDL DAADELTARV RINYWSDHLD ALREVGLTTN AGSDMAETGA IKSYTDGSFG GRTARLSEPY ADAPGETGQW VVDPDELAET VADATGAGYQ FTAHAIGDEA IDAVLDAYEE ESHTDPGAAR HRIEHVELAD DAAIERLAET GVVASVQPNF LKWAGADGLY EGRLGPERTA ETNRYRDMLD AGVHLAFGSD GMPMDPLLGV HHAVNAPAPA QRLTVTEALR AYTRGAAYAG FDEDRLGTVE PGKCADFAVL DASPWEESDA IRGVDVAMTV VDGEVVYDGR
|
| |