Gene Hlac_1574 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_1574 
Symbol 
ID7401507 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp1591464 
End bp1593086 
Gene Length1623 bp 
Protein Length540 aa 
Translation table11 
GC content71% 
IMG OID643708640 
ProductAmidohydrolase 3 
Protein accessionYP_002566230 
Protein GI222479993 
COG category[R] General function prediction only 
COG ID[COG1574] Predicted metal-dependent hydrolase with the TIM-barrel fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCCAG CCCCGGACTC GGCCATGACC GACGCCGCGG ACCGGCTGTT CGTGAACGGG 
GAGATACACA CGCTTGCGAC TCCCGACGAG ACCCACGAGG CCGTCGCCGT GCGGGACGGC
GCGGTCGTCC GCCTCGGTCG GAGCCACGAG GTGCGGTTCC TCGAAGGCGT CGACACCGAG
GTGATCGATC TCGACGGTTG CGTGCTCCTC CCCGGCTTCG TCGACGCGCA CACCCACCTG
ACGACGGTCG GGCGCTACCT TGTCCACGCC GACCTCTCGG TCGCGGACTC GCCGATGGAG
GCGGTCGATC TGCTTGCGGA ACGGGCGGCA GCGGTCGAGG ATGGGAACTC GGACGCGTCG
GACGGCGGGT CCGACGACCC CGCAACCGAC TGGGTGCTCG GCTACGGCTA CGACGAGTCG
ACGTGGGACG ACGACCGCTA CCTGACCCGC GAGGACCTCG ACCGCGTCTC GACGGAACGT
CCCGTCGCGG CCGTCCGCGA GGACATGCAC GTCGCCGCGG TCAACGGGGT CGTCCTCGAC
CGGTTCGCGG ACGCTCTCGA CTCGGTCCCC GACGAGACGG TGCCGACCGA CGACGCGGGC
GAGCCGACGG GCGTCCTCCT AGAGAGCGCG ATCGATCCGA TCTACGAGGC GGTCGAACCG
GGGCCGGCGG CGACTCGCGA CCTCGTCACC GCTGCGCTCG ACGACTGCGC CGCCAAGGGG
ATCACGGGCT TTCACGACAT GGTGCGAAAC TCGCACGCTC CGCGCGTCTA CCGCGACCTC
GACGCCGCCG ACGAGCTGAC CGCACGTGTC CGGATCAACT ACTGGAGCGA CCACCTCGAC
GCGCTGCGGG AGGTCGGCCT GACGACGAAC GCCGGAAGCG ACATGGCCGA GACGGGCGCG
ATCAAGTCGT ACACCGACGG GAGCTTCGGC GGGCGGACCG CGAGGCTCTC CGAACCGTAC
GCGGACGCAC CGGGCGAGAC CGGGCAGTGG GTCGTCGACC CGGACGAACT GGCAGAGACG
GTCGCGGACG CGACCGGGGC GGGCTACCAG TTCACCGCCC ACGCGATCGG CGACGAGGCG
ATCGACGCCG TCCTCGACGC CTACGAGGAG GAGTCGCACA CCGACCCCGG CGCGGCGCGT
CACCGGATCG AACACGTCGA ACTCGCAGAC GACGCGGCGA TCGAGCGGCT CGCGGAGACG
GGCGTGGTCG CCAGCGTCCA GCCGAACTTC CTCAAGTGGG CGGGCGCAGA CGGGCTTTAC
GAGGGGCGTC TCGGGCCGGA ACGCACCGCC GAGACGAACC GCTACCGCGA CATGCTCGAC
GCGGGAGTTC ACCTCGCGTT TGGCTCCGAC GGAATGCCGA TGGACCCCTT ACTCGGCGTC
CACCACGCCG TCAACGCGCC GGCCCCTGCC CAGCGGCTCA CGGTGACCGA GGCCCTGCGC
GCGTACACCC GGGGCGCGGC GTACGCGGGC TTCGACGAGG ACCGGCTCGG CACGGTCGAG
CCCGGCAAGT GCGCCGATTT CGCCGTCCTC GACGCGTCGC CGTGGGAGGA GTCGGACGCG
ATCCGCGGGG TCGACGTGGC GATGACGGTC GTCGACGGCG AGGTCGTATA CGACGGGCGG
TAA
 
Protein sequence
MLPAPDSAMT DAADRLFVNG EIHTLATPDE THEAVAVRDG AVVRLGRSHE VRFLEGVDTE 
VIDLDGCVLL PGFVDAHTHL TTVGRYLVHA DLSVADSPME AVDLLAERAA AVEDGNSDAS
DGGSDDPATD WVLGYGYDES TWDDDRYLTR EDLDRVSTER PVAAVREDMH VAAVNGVVLD
RFADALDSVP DETVPTDDAG EPTGVLLESA IDPIYEAVEP GPAATRDLVT AALDDCAAKG
ITGFHDMVRN SHAPRVYRDL DAADELTARV RINYWSDHLD ALREVGLTTN AGSDMAETGA
IKSYTDGSFG GRTARLSEPY ADAPGETGQW VVDPDELAET VADATGAGYQ FTAHAIGDEA
IDAVLDAYEE ESHTDPGAAR HRIEHVELAD DAAIERLAET GVVASVQPNF LKWAGADGLY
EGRLGPERTA ETNRYRDMLD AGVHLAFGSD GMPMDPLLGV HHAVNAPAPA QRLTVTEALR
AYTRGAAYAG FDEDRLGTVE PGKCADFAVL DASPWEESDA IRGVDVAMTV VDGEVVYDGR