Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hlac_1476 |
Symbol | |
ID | 7400304 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorubrum lacusprofundi ATCC 49239 |
Kingdom | Archaea |
Replicon accession | NC_012029 |
Strand | - |
Start bp | 1483419 |
End bp | 1484114 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 643708538 |
Product | halocyanin domain protein |
Protein accession | YP_002566134 |
Protein GI | 222479897 |
COG category | [C] Energy production and conversion |
COG ID | [COG3794] Plastocyanin |
TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence [TIGR03102] halocyanin domain |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACATCCA ACGCCGACGA GACGACGATG AGTCGCCGCG GATTGTTCAG GGTCGGCGCA GCGGGCGCCG CCGCCGCGAC CGGCCTCGCC GCCGGCTCCG GCGGGGTAGC GGCCCAGTAC GACGGCTGGC TGGACGACGT CGACAACTAC GACGGCACCC ACGATTACAC GGGACAGGAC GAGGTCACGG TCGCAGTCGG CGCGGTCGAC GGCCTCAAGT TCGGGCCGGC CGCGATCCTG ATCGACCCCG GGACGACGGT CGTTTGGGAG TGGACCGGTG AGGGCGGCGC CCACAATGTC GTCGCCGACG ACGAGACATT CAACAGCGGG GACCCGGTCA GCGAGGAGGG AGCCACCTTC GAGTACACCT TCGACGACGC GTCCGACGGC GACACGTTCA ACTACCTCTG TGTCCCCCAC GAGGCGGTCG GCATGAAGGG CGTTGTCGCG ATCGGATCGG TCGACGACGA CCTCGTGACG CCCGGCGGCG ACGGGGGAGA TGGCGATGAC GGCGGCGACG GCAACGCCAC CGACGGCGGA AATACGACCG ACGGCGGGAA CGCATCCGAC GGCGGACCCA GCGCCCCCGA CCTCTCCGCC AACGACATCG GGGCGCTCGC GCTCGCGCTC GGCTTCGCCG GGGCGCTGCT CGTACCGCTG TTCTACGCGG CCCACAAGAT GGCCAGCGAA GAGTAG
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Protein sequence | MTSNADETTM SRRGLFRVGA AGAAAATGLA AGSGGVAAQY DGWLDDVDNY DGTHDYTGQD EVTVAVGAVD GLKFGPAAIL IDPGTTVVWE WTGEGGAHNV VADDETFNSG DPVSEEGATF EYTFDDASDG DTFNYLCVPH EAVGMKGVVA IGSVDDDLVT PGGDGGDGDD GGDGNATDGG NTTDGGNASD GGPSAPDLSA NDIGALALAL GFAGALLVPL FYAAHKMASE E
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