Gene Hlac_1418 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_1418 
Symbol 
ID7400737 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp1430560 
End bp1432008 
Gene Length1449 bp 
Protein Length482 aa 
Translation table11 
GC content72% 
IMG OID643708479 
Productphosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I 
Protein accessionYP_002566076 
Protein GI222479839 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1109] Phosphomannomutase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACTTGT TCGGAACCGC GGGGATCCGC GGTAGCGCCG AAACGCGAGT GACACCGGAG 
CTCGCGTTGG CCGTCGGCCG CGCCGTCGCG GCTGAAGTAC GAGCGGCTGA AGAGGGGACG
AGACCCGACG AGGTCGTCCT CGCGCGTGAC GGACGCGTGA CGGGTCCGGC GATCGCGGCC
GCGATGGAGT CGGGCCTCGC GTCCGGGGGC GTCCGGGTGC TCCGCGCCGG GCGGCTCCCG
ACCCCGGCGC TCGCGCACGC CTCGCAGGGA CGGTACGGCG TGATGCTCAC GGCCTCGCAC
AACCCGCCGA CCGACAACGG GATCAAGCTG TTCCGAGACG GCAGCGAGTT CGACCGGGAG
GCCGAGCGCG CCGTCGAGGA ACGCGTCGCG GGCGAGGAGC CCCCGGCGGC GTGGGACGAG
TGGACCGAGA CGGAGCGCGT CGACACCCTC GACGGCTACC TCGACGCGGT CCGCGCGTAC
GCGGAGGGGT TCGGGGACGA TCTCGACGGC CTCCGGATCG CGGTCGACTG CGGGAACGGG
ATGTCCGCGC CCGCGACGCC GACTGTCCTG CGAGAGCTGG GCGCCGAGGT CGTTACACTC
AACGGGAACA TCGACGGCCA CTTCCCCGGG CGCGGGAGCA AGCCGACCCC CGAGAGCCTG
CGTGACCTCC GGGCGTTCAT CGCCGACGCC AACGAGGGGG TGGCCGCTCC CGGACGCCCC
GGCGCCGAGA TCGACGCCGA GGGGTTCGCC TTCGGGATCG GCCACGACGG CGACTCGGAC
CGTATCGTGA TCATCGACGC CGACGGCGAC GTGGTCCACG AGGACACCGT CCTCGCGCTG
CTCGCCGAGC GGTACACCCG CGAGAGCGAC GCCGCCGACC CGGTGGTCGT GACGACCCCG
AACGCCTCGG GCCGGATCGA CGAGCGCGTC CGCGAGGCCG GCGGGCGGGT CGAACGCGTC
CGCCTCGGCG CGCTCCATGA GGGGATCGCG GCGGTGCGGG CGGAGAGCGC CCCCGGCGAC
GACACCCGCG TCGTCTTCGC CGCGGAGCCG TGGAAGCACA TTCACGTCGG CTTCGGTGAG
TGGATCGACG GCGTCGCATC GGCGGCCGTG ATCGCCCGGC TCGTCGCCGA GTCGGGACTC
GACGCGCTCC GCGAGCCGAT CACGGAGCGC CCGTACCGCA AGGTCAGCAT CGACTGCCCG
GACGAGGCCA AGCCCGGGGT GATGGACCGA TTGGGATCGA CTCTGCCGGA TGCCTTCCCC
GACGCGACCG TCGACACCGA CCACGGGGTC CGATTGGAGT TCCCGGACGC GTCGTGGACT
CTCGTGCGAC CGTCCGGCAC GGAGCCGTAC GTGCGGATAT ACGCCGAAAG CGACGAGGTC
GATGAGCTGA TCGCGGATGT CGAGGCAGTC GTCGAGGACG TGGTGGCCGC GGTCGCTGAC
GCCGAGTAG
 
Protein sequence
MDLFGTAGIR GSAETRVTPE LALAVGRAVA AEVRAAEEGT RPDEVVLARD GRVTGPAIAA 
AMESGLASGG VRVLRAGRLP TPALAHASQG RYGVMLTASH NPPTDNGIKL FRDGSEFDRE
AERAVEERVA GEEPPAAWDE WTETERVDTL DGYLDAVRAY AEGFGDDLDG LRIAVDCGNG
MSAPATPTVL RELGAEVVTL NGNIDGHFPG RGSKPTPESL RDLRAFIADA NEGVAAPGRP
GAEIDAEGFA FGIGHDGDSD RIVIIDADGD VVHEDTVLAL LAERYTRESD AADPVVVTTP
NASGRIDERV REAGGRVERV RLGALHEGIA AVRAESAPGD DTRVVFAAEP WKHIHVGFGE
WIDGVASAAV IARLVAESGL DALREPITER PYRKVSIDCP DEAKPGVMDR LGSTLPDAFP
DATVDTDHGV RLEFPDASWT LVRPSGTEPY VRIYAESDEV DELIADVEAV VEDVVAAVAD
AE