Gene Hlac_1384 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_1384 
Symbol 
ID7400703 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp1393502 
End bp1394065 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content67% 
IMG OID643708446 
Productprotein of unknown function DUF192 
Protein accessionYP_002566043 
Protein GI222479806 
COG category[S] Function unknown 
COG ID[COG1430] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGACGAC GGGGAGTCCT CGCGGCGATA GGTGTCGCGT CGATCGGCGG GCTCGCGGGG 
TGCGGCGGGA GCGCCCCTAC GGAGGACGAT GGGGGAGAGG ACGGCGAGGG CGGCCGGAAC
GACACCGGCA CTGACGACCT CCCGACCGAC TGGCCCTCCG GGACGTACGC CGACTACGAC
GCGGCCACGG TCACGGTTCG GAGTCCCGAG GACGACGATT TGGGTGCGGT TCGGGCCGCG
ATCGCGGATA CGAGGGAGAA GCGCTATCTC GGCCTGAGTG ATGCGACTTC GCTCCCGGAA
AACGCCGGGA TGCTGTTCGT CTTCTCAGAG CCGCGAGACT CGCTGCGGTT CGTCATGCGC
GAGATGGACT TCGGGATCGA CATCATCTAC GCCGACGCCG AGGGAACGAT CACTCGGATC
CACAACGCGC CGGAACCGGG GCCGAACGAG GACGGGAGCG AGCAGCGGTA TCCGGGCTCG
GGTCAGTACG TGCTCGAAGT CCCGTATAAG TGGACCGACC GCAACGGGAT CGAGGTCGGC
GATACGCTTG CGTTCGATCT GTGA
 
Protein sequence
MRRRGVLAAI GVASIGGLAG CGGSAPTEDD GGEDGEGGRN DTGTDDLPTD WPSGTYADYD 
AATVTVRSPE DDDLGAVRAA IADTREKRYL GLSDATSLPE NAGMLFVFSE PRDSLRFVMR
EMDFGIDIIY ADAEGTITRI HNAPEPGPNE DGSEQRYPGS GQYVLEVPYK WTDRNGIEVG
DTLAFDL