Gene Hlac_1378 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_1378 
Symbol 
ID7400697 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp1389773 
End bp1390393 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content64% 
IMG OID643708440 
ProductGTP-binding protein 
Protein accessionYP_002566037 
Protein GI222479800 
COG category[R] General function prediction only 
COG ID[COG0218] Predicted GTPase 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGAAG ACCGGCCGGA CCGCGACGCC GAGGTCGTCC TCGTGGGGCG CTCGAACGTC 
GGCAAGTCCA CGCTGATGCG CGAGCTGACG GGCCACGACT TCTCGACCGG CGGCAAGCCC
GGAGTCACCC GCCAACCGAA CCACTTCGAC TGGGCCAGCG AGAGCTTCAT GTTCACGGAC
CTGCCCGGGT TCGGGTTCAT GTCTGGCGTC GAAGAGGAGC ACCGCGAGGC GATCAAAACG
AACATCGTCC GCTATCTAGA GGAGAACGCC GACTCGATTC TGGCGGGCGT CGTCGTGATG
GACGGGAAAG CCGCCGTCGA CATCATCGAC CGCCACGCCG AGCGCGGGAA CATCCCCCAC
GACGTGGAGA TGTTCGGCTT CTTAGAGGAC GTGGGCGTCG AGCCCATCGT CGCCGTCAAC
AAGACCGACA AGATCGACGA CCTCGACGAG CGGCTCGACG AGATCTGTGA TCGCCTCGGG
CTGTACCCGC CGTGGCAGCA GTGGTCTGAC CAGATCGCCC CGATCTGCGC GAAGCGAGGC
GACATCGAGG CGTTAGAGGA GTGTCTTCGG ACCCGCTTCC ACGAGCACAA CCGCGACGAC
CTGCTGAAGT TCGTTTCGTG A
 
Protein sequence
MFEDRPDRDA EVVLVGRSNV GKSTLMRELT GHDFSTGGKP GVTRQPNHFD WASESFMFTD 
LPGFGFMSGV EEEHREAIKT NIVRYLEENA DSILAGVVVM DGKAAVDIID RHAERGNIPH
DVEMFGFLED VGVEPIVAVN KTDKIDDLDE RLDEICDRLG LYPPWQQWSD QIAPICAKRG
DIEALEECLR TRFHEHNRDD LLKFVS