| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_0336 |
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| Symbol | |
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| ID | 7399728 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorubrum lacusprofundi ATCC 49239 |
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| Kingdom | Archaea |
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| Replicon accession | NC_012029 |
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| Strand | + |
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| Start bp | 359762 |
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| End bp | 361150 |
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| Gene Length | 1389 bp |
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| Protein Length | 462 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 643707400 |
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| Product | tRNA CCA-pyrophosphorylase |
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| Protein accession | YP_002565010 |
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| Protein GI | 222478773 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1746] tRNA nucleotidyltransferase (CCA-adding enzyme) |
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| TIGRFAM ID | [TIGR03671] CCA-adding enzyme |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.724572 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0285087 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGATC TCGAGGCGGT GCTGTCGCGC GTTCGCGACC GGGCGGTCCC CGAGCCCGCG
GAGCGCGACC GCCTGCGAAC GGTCGCCGTC GAGCTCGCCG ATCGGACGCG CGAGGCGATT
GCCGACCTCC CCGTCGACGC CGATGTGGTA CAGGTGGGGT CGACCGCTCG CGACACGTGG
GTCTCCGGCG ACCGCGACAT CGATCTCTTC GTGCGGTTCG ACGCCGCCCT CGACCGCGAA
CAGCTAGAGG AGTACGGGCT CGCCGTCGGC CACGCCGTCC TCCCGGACGG CCACGAGGAG
TACGCGGAAC ACCCCTACGT GAAAGGCACT TACGAGGGGT TCGACGTGGA TCTGGTCCCC
TGTCACGACG TGGAGACCGC CGGCGACCTG ATCTCCGCCG TCGACCGGAC CCCGTTCCAC
GACGCATACC TCTCCGCGCG GCTGGATGAG GGACTCGCCG ACGACGTGGT GCTTGCGAAG
GCGTTCCTGA AGGGAATCGG CGCGTACGGG AGCGACCTCC GCACCGAGGG GTTCTCGGGG
TACCTCACCG AGCTGCTCGT CTTGGAACTG GGCGGGTTCG TCCCCCTCGT GGAGTCCGCC
CGGAGCTGGC ACCCGCCCGT GGAATTCGAT CCCGAAGGGC ACGCCGAGCG GACCTTCGAC
GACCCGCTCG TCGTGGTCGA TCCGACCGAT CCGACGCGGA ACGTCGCGGC CGTCCTCTCG
GCCGAGAACC TCGCTCGGTT CCAGCACTAC GCCCGCGAAC TGCTTGCAGC CCCGAGCGAG
GCGCCGTTCG AACCGGTGGA TCCGGCTCCG CTGGACCCTA CCGACGTTCG CGACCATCTC
GACCGACGGG AAACGACTCC GGTAGCCGTC GTGTTCGACG CGCCCGACCT AGTTGACGAC
CAGCTGTGGC CGCAGCTCCG TCGGTCGCTT GACGGGATCG TTCGGGGGTT GAACGATCGC
GGCTTCGACG TGCTCCGTGC GCGCGCGATG ACGGACGGGA GCGGTCCGGA GGCTGACGGA
GACGGAGCCA AGCGCGCCGC GCTGTACGCC GAACTGGAAG TCGCAGAGCG GCCGGCCGTC
ACACGCCACG AAGGGCCGCC GGTCGCGGTG CGGAAACACG CCGCGAGCTT CTACGAGTCG
TACGCCGACG ACGTTGATCC GGAGACGTAC GGCCCGTTCA TCGACGGCGA CCGGTACGTC
GTCGAGCGCG AACGGGAGTT CACGACGGTC CGCGAGTACC TCGAAAGCGA CGCGGCCGGC
GATGTCGCGC TCGGTGCGCA GGTAGAACGA GAGTTCGCCG AGCGCGACGT GCTGGTCGGG
GACGCGGTGG CGACGCTCGC GCCCGCGTTC GGGGTGCCGC TCAGGGAGTT CTACGAGCCG
CACCCGTGA
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| Protein sequence | MDDLEAVLSR VRDRAVPEPA ERDRLRTVAV ELADRTREAI ADLPVDADVV QVGSTARDTW
VSGDRDIDLF VRFDAALDRE QLEEYGLAVG HAVLPDGHEE YAEHPYVKGT YEGFDVDLVP
CHDVETAGDL ISAVDRTPFH DAYLSARLDE GLADDVVLAK AFLKGIGAYG SDLRTEGFSG
YLTELLVLEL GGFVPLVESA RSWHPPVEFD PEGHAERTFD DPLVVVDPTD PTRNVAAVLS
AENLARFQHY ARELLAAPSE APFEPVDPAP LDPTDVRDHL DRRETTPVAV VFDAPDLVDD
QLWPQLRRSL DGIVRGLNDR GFDVLRARAM TDGSGPEADG DGAKRAALYA ELEVAERPAV
TRHEGPPVAV RKHAASFYES YADDVDPETY GPFIDGDRYV VEREREFTTV REYLESDAAG
DVALGAQVER EFAERDVLVG DAVATLAPAF GVPLREFYEP HP
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