| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_1526 |
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| Symbol | |
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| ID | 4711480 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | - |
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| Start bp | 1653853 |
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| End bp | 1656123 |
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| Gene Length | 2271 bp |
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| Protein Length | 756 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639855993 |
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| Product | RND efflux transporter |
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| Protein accession | YP_001003095 |
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| Protein GI | 121998308 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1033] Predicted exporters of the RND superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAGGCGTA TGACTTTGCC GCGGTGGTTG GCGGCGACCT TGTTTGCGTT GCTGCTGCTG
GCGCCAGGCC CGCTCGTGCT CAACCTGACC TTCGACAATG CGCCGGAGTC GTACTTTCCC
AAGGAGGCAC CGGCCGTCCT TTTCGACGCT TCGGTGCGCG AGGAGTTCCC GGAGGAGCAG
GTCCTGGTCG GCCTGTTCGG CGGCGAGGAG ATCTACGAGC CCGAGAATCT TAGCGCGCTC
CATGAGCTTA TCCAACACCT GGAGGAGAAC CGGCAGGTCG AGCGAGTGCT GGGTGTAACG
TCATTCGATC AGATTCGGGC CGTCGACGAT GGCTTCACGG TCGAGAAGAT CGTCCCCCCG
GGCGCCATTC CAGAACGGAG CGGGAGTCAG TGGCAGGAGC ACGTCCGGGC AGATCGTTTT
GCACCGGGGT TGCTGGCTGC GCGGGATAGT TCGGCCCTGG CGATCATCGT GCGCCCGACT
GAACTGGAAG ACAGTCTGCA GCGGCTGGAG CTTGAGCGGG CCTTCCGCGA GGCGGTGGCC
GAGGCCGGCC TGGATGAGCG GCTACAGGCG GTTGCCGGCC ACGTCGCGCT GGATGTCTGG
CAACTGCGCT CCATGCTGCG GGATAGCGCC GTCTTTATTC CGGCCACCAC AGCGGTAGGC
CTCGGACTGC TGTTCTGGAT GTTCCGGCGA TGGCTGGTGG TGGTTGCCGG AGGGGCGGCG
ATTGGTGCGG TCGTCTCGCC TGCGCTGGCG CTGATGGTGC TGCTGGGTCA TCCGTATACC
CTGGTGACGT CCATATTGCC ACCGTTGCTG GCCGCGCTGA CGGTGGCAAT GCTGATGCAC
CTGTTCAACG CGCTGAGCCA CGCGCATCGA CGCGGCTACA CCGAGGAAAG CGCGCTGGCC
TATAGCTTGG AAAGGGTCTC TAGGCCGGCA TTGTTTACCG CTCTGACAAC GGCTGCGGGG
CTGTTGTCGC TCACACTGAG TCCGATCCGT CCCATCGAGA GCCTGGGGTA TACCGCAGCG
TTCGGCGTAC TCCTAGCCTA CTGTGTCGTT ATGGTGCTTT TGCCACCATT GCTCGCGCGT
TTCGACCGCG GCAATTGGTC GCTGCCGCGC CGCGGGATCG GTGGCCTCGA CGCGATCCTT
AAGGCGGCTC GTGGATTCGC GCTGCGTCGG GCGGGCTGGA TCGTCGCAGT CAGCGCGTTG
GCGATTGCAG CGACGGCGCC GCTGATCACG AAGATCGAAG TCGAGAGTGA TCTCTACGAG
TTCTTCCCGG CGGGCCATCC CATCACCCAA GACACCCGCA AGGTCGAAGA CGCGCTCTCC
GGTGTGATGG TGGTGGAGGC GGTTTTCGAC GCCGAGGCTA TCGACGGGCT GCAGGATCCG
GCTGCCTTGC AGGAGATTCG GGACTTCCAG CGCTGGGCCG AACAGCGGGA GGAGGTGGAC
TACGCCCTAT CGATGGTGGA TATGCTCGAG GAGATGCACT GGGCGTTCCA CGACGAGGAT
CCGGAGTTCC GGACCCTGCC CGGTCGGCAA GATCTGATTG CCCAGTACCT GTTCGTATAC
GACGGGCGAG ATCTCTACGA CCTGGTCAAT CGGGATTTCA CGCGGGCCAT CGTCCTGATG
AACCTGAACG TCACCGGCGC TCGCGAAATC GGTCAGACTC TTGAGGCGTT TCGGGGGGAG
CTTGACTCGA GCGTTGAGGT TCTGGATTGG GAGCTCTCCG GGATGGGGCG GCTCTTTGCC
GAACAGGAAG AACTGCTCAT AGAGGGGCAG CTTCGTAGCC TCATTGCCGT GGCCGTGATG
ATCTCGGTGT TGATGTTGGT CCTCTGGCGC TCGGCGGCGG CGGCTTCTGT GACCATGCTG
ACGAATCTAT CTCCGTTGCT GGTCATCTTC ATTGTCATGG GGGCCTTCGG CGTCTGGCTC
GATATGGCGA CGGCCATGGT GGCGAGTGTG GCAATCGGCA TCGCGGTGGA CGATACCATC
CACACCTACC ACGGGTTCCT CTTCTATCGG CGCAGAGGGA GCAGTGTCGT TGCTGCATTG
GCCCGGGCGT TGCAGCATAC GGGCCGGGCG GTAACGGCGA CGACTATTGT CCTGTGTGCG
CAGTTCCTGG TTCTGGCTGC TTCAGACTTC CAGCCAACCG CGGCCTTTGG TCTGCTTACG
GCCATCGGTC TGGTCGCGGC ACTGCTCTTC GACTTGCTCC TCATGCCGGC GATAGTCACG
GTGCTTGCGA AGCGCTTTCC GAGGCTTAGT CTGGGGCGGG TATCCGCTTA G
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| Protein sequence | MRRMTLPRWL AATLFALLLL APGPLVLNLT FDNAPESYFP KEAPAVLFDA SVREEFPEEQ
VLVGLFGGEE IYEPENLSAL HELIQHLEEN RQVERVLGVT SFDQIRAVDD GFTVEKIVPP
GAIPERSGSQ WQEHVRADRF APGLLAARDS SALAIIVRPT ELEDSLQRLE LERAFREAVA
EAGLDERLQA VAGHVALDVW QLRSMLRDSA VFIPATTAVG LGLLFWMFRR WLVVVAGGAA
IGAVVSPALA LMVLLGHPYT LVTSILPPLL AALTVAMLMH LFNALSHAHR RGYTEESALA
YSLERVSRPA LFTALTTAAG LLSLTLSPIR PIESLGYTAA FGVLLAYCVV MVLLPPLLAR
FDRGNWSLPR RGIGGLDAIL KAARGFALRR AGWIVAVSAL AIAATAPLIT KIEVESDLYE
FFPAGHPITQ DTRKVEDALS GVMVVEAVFD AEAIDGLQDP AALQEIRDFQ RWAEQREEVD
YALSMVDMLE EMHWAFHDED PEFRTLPGRQ DLIAQYLFVY DGRDLYDLVN RDFTRAIVLM
NLNVTGAREI GQTLEAFRGE LDSSVEVLDW ELSGMGRLFA EQEELLIEGQ LRSLIAVAVM
ISVLMLVLWR SAAAASVTML TNLSPLLVIF IVMGAFGVWL DMATAMVASV AIGIAVDDTI
HTYHGFLFYR RRGSSVVAAL ARALQHTGRA VTATTIVLCA QFLVLAASDF QPTAAFGLLT
AIGLVAALLF DLLLMPAIVT VLAKRFPRLS LGRVSA
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