Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hhal_1290 |
Symbol | |
ID | 4709408 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhodospira halophila SL1 |
Kingdom | Bacteria |
Replicon accession | NC_008789 |
Strand | + |
Start bp | 1401710 |
End bp | 1403038 |
Gene Length | 1329 bp |
Protein Length | 442 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 639855761 |
Product | Pyrrolo-quinoline quinone |
Protein accession | YP_001002863 |
Protein GI | 121998076 |
COG category | [S] Function unknown |
COG ID | [COG1520] FOG: WD40-like repeat |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.366106 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGGTTCA CTATGGTTGA TAACAAAACC CCTCAGATTA GTGTACAGAA AATCACGCTA AGGATCTTTA TGGGGGCGTG CTTTATCCTG ATGTGTATAG CCTGTAACTC ATCGAGCGAC AACGATGAAA CGGAGCACGA GAGTGATACG CCGGAGGTAA CACATGAATT AACTCTCGAA CCCAGTGAAT CCAGCCTTAA AGCTGAGTGG CTTGACTCTG AGGATGTGAC CTACAATCTG ATTTACGGCC AGGACGAGGA CATTTTAACC GATCCAGCTA ACTACGCCAC CTACGATGGG AGCATGGATC AAGACGTCAG CTCTCCACAT GAAATCAAGG GACTGGAAAA GGAATCGACT TACCATGTTG TTCTTGAAGT TGACGACGAG CGTGGCACCC GTTATCCAGC GAAAGAATCA ACTACGCTGA ATTCGGAAAA AATTTTAAGC TCGAGCGATG TGTTATGGAT ATTTGAAAAG CATGATGGAG TCGTACGTAG CCTCGCAGCG TATGATAGCA CCGTTTACAG CAGCGGCAAC GATGAGACGG TCCGCGCCAT AGACGCAAAA AGTGGGGACG AGATATGGGT TTTTGAGGAG CATTTTGACT TTATCTACAG CGTTGAAAAC TATGAGGGCA CAGTCTACAG CGCTGCCCGA GGCGGTGCAT CAAGCATAAA AGATGGTTAT GATAGCACCG TCCGCGCAAT TGATTCTGGA ACAGGTGAAG AGAAATGGGT GTTTGACGGT AACAGATCTT TTTATGACGT TGCCGCAGCC GACAACTCCG TATATGCTGC AAAATCAAGC GGGAGCGTCC TTCAGATAGA CGCTGAAAAA GGATCAAGGA AACAGGTTAT CGGACAACAT GATCGTCAAG CCAGAGGCGT TGCGGTAGCG GGCGGGACTG TATTTAGCGC CGGTCATGAT ACAACTATAC GCGCTTTCGA CGTAGAACAA GAAGAAGAGA AATGGGTCTA CGAGGGGCCA GAAAGCCCCC ACAAAAACTT CTTGAGTGTT GCAGCAACCA AGGAAGCAGT TTACGCGGGC AGCGACACCT CTATAAGGGC GCTTGACGCT GATACAGGCG AGAAGCAGTG GGCTTATGAG GACATACAGT CCGGTGGGTT TTACACCGTT AAAGAACTTG GCGACGTGGT ATACGGCGGA AGCCTTGACG GAAAAGTTCG GGCAATCGAT TCGAAAACGG GTGAAAAGAA GTGGGTCTTT GCAGAACATG AAGACCACGT GCGGGCTGTC GTGCCAACCG AACATGCTAT ATATAGTGGC GATAGCGGCG GGACAATCTT AGCTATTGAT CCCCCTTGA
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Protein sequence | MRFTMVDNKT PQISVQKITL RIFMGACFIL MCIACNSSSD NDETEHESDT PEVTHELTLE PSESSLKAEW LDSEDVTYNL IYGQDEDILT DPANYATYDG SMDQDVSSPH EIKGLEKEST YHVVLEVDDE RGTRYPAKES TTLNSEKILS SSDVLWIFEK HDGVVRSLAA YDSTVYSSGN DETVRAIDAK SGDEIWVFEE HFDFIYSVEN YEGTVYSAAR GGASSIKDGY DSTVRAIDSG TGEEKWVFDG NRSFYDVAAA DNSVYAAKSS GSVLQIDAEK GSRKQVIGQH DRQARGVAVA GGTVFSAGHD TTIRAFDVEQ EEEKWVYEGP ESPHKNFLSV AATKEAVYAG SDTSIRALDA DTGEKQWAYE DIQSGGFYTV KELGDVVYGG SLDGKVRAID SKTGEKKWVF AEHEDHVRAV VPTEHAIYSG DSGGTILAID PP
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