| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_0952 |
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| Symbol | |
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| ID | 4709400 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | + |
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| Start bp | 1027168 |
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| End bp | 1028091 |
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| Gene Length | 924 bp |
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| Protein Length | 307 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 639855421 |
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| Product | histone deacetylase superfamily protein |
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| Protein accession | YP_001002530 |
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| Protein GI | 121997743 |
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| COG category | [B] Chromatin structure and dynamics
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0823921 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACGACCT GGCTGATCAC CCACCCCCAG TGCCTCGAGC ACGACGCCGG CACCGGCCAC
CCGGAGAGCG CCGCGCGCCT GCAGGCCATC CTGCAGGCGC TGCAGCACGC CACCTTCGAG
TACGTCCTGC GCGAGGAGGC ACCGCTGGCG ACGGTCGAGC AGCTAGAGCT GGCCCACGAC
CCGACCTACG TACGCTCGCT GCTCGATAGC GTCCCCGCCG AAGGGGCCCG GCACATCGAC
CCGGACACCC GGCTCTGCCC GGCCACCGGC GAGGCCGCCC GGCGGGCCGC CGGGGCCGTC
TGCCACGGGG TCGACGGCGT GCTCTCGGGC AAGGCGCAGC GGGTTTTCTG CGCGGTGCGC
CCACCCGGCC ACCACGCCGA GCCGGACCGC GCCATGGGCT TCTGCTTCTT CAACAACATC
GCCGTCGGCG CCGGCCACGC GGTGGCGCAC TACGGCCTGC AGCGGGTGGC GATGATCGAT
TTCGACGTCC ACCACGGCAA CGGCACCGAG GCGATCAGCC GCGGCCGCCC GGGGTTCTAC
TACTTCTCGA CCCACCAGCA CCCGCTGTTC CCCGGCACCG GCACTCCGGG CAGCGACGCC
CCGGCGAATA TCGTCAACGC CACCCTGGCC GACGGCGACG GCTCCGAGGC CTTCCGTGAG
GCCTTCACGG GGACCATCCT CCCCGCGCTG GAGGATCTGC AGCCGGAGCT GATTCTGATC
TCGGCGGGCT TCGATGCCCA CCGCTCCGAT CCGTTGGCCA CCCTGCAACT GGACGAGACC
GACTTCGCCT GGGCCACCCG AGAGCTGGTG GACGTGGCCA AGCGCCACTG CCAGGGGCGG
GTGGTCTCGG TCCTCGAGGG CGGCTACAAC ACCTCCGTGG TCGGCCGCTG CGCCGCGGCC
CACCTCGAGG CGCTGATGAT GTAG
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| Protein sequence | MTTWLITHPQ CLEHDAGTGH PESAARLQAI LQALQHATFE YVLREEAPLA TVEQLELAHD
PTYVRSLLDS VPAEGARHID PDTRLCPATG EAARRAAGAV CHGVDGVLSG KAQRVFCAVR
PPGHHAEPDR AMGFCFFNNI AVGAGHAVAH YGLQRVAMID FDVHHGNGTE AISRGRPGFY
YFSTHQHPLF PGTGTPGSDA PANIVNATLA DGDGSEAFRE AFTGTILPAL EDLQPELILI
SAGFDAHRSD PLATLQLDET DFAWATRELV DVAKRHCQGR VVSVLEGGYN TSVVGRCAAA
HLEALMM
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