Gene Hhal_0899 details

Gene Information

• Locus tag: Hhal_0899
• ID: 4711418
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Halorhodospira halophila SL1
• Kingdom: Bacteria
• Replicon accession: NC_008789
• Strand: -
• Start bp: 974984
• End bp: 975643
• Gene Length: 660 bp
• Protein Length: 219 aa
• Translation table: 11
• GC content: 72%
• IMG OID: 639855368
• Product: riboflavin synthase subunit alpha
• Protein accession: YP_001002477
• Protein GI: 121997690
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG0307] Riboflavin synthase alpha chain
• TIGRFAM ID: [TIGR00187] riboflavin synthase, alpha subunit

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 0.484781
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTCACCG GGATCGTGGA GACCTGCGGC CGCGTGGCCG CCATCGAGCA CAGCGGCGAG 
GGGCGGATCC TGCGCATCGA TGCTCCCCGG CTGGGCCTGG CGGAGTGCCG GATCGGCGAC 
AGCATCGCCG TCGACGGCGC CTGCCTGACC GCCACCGGGA TCGAGGATGG GCAGTTCCGT 
GCCGACGTCT CCGATGAGAC CCTGCGCTGC ACCACCCTGG GCGGGTTGCG CAGCGGGGTG 
CGGGTCAACC TGGAGCGGGC GGTCACCCCG TCGACGCCGC TGGGCGGGCA CCTGGTGACC 
GGACATGTCG ACGGCGTCGG CGAGGTGGTC GAGCGGGCCC CCGCCGGGGG GTCCGAGCGC 
TGGCGCTTCC GGGTCCCGGA GGGGCTGGCC CGCTATGTGG CGGTCAAGGG CTCCATCGCC 
GTGGCCGGGG TCAGCCTGAC CATTAACGCC GTCGCTGGAC GGGAGTTCGA GGTCAACCTG 
ATCCCGCACA CCCTCGACGC CACCAACCTG GGGGAACGCC GCGCCGGCGA TCCGGTCAAC 
ATCGAGGTGG ACCTGGTGGC CCGTTACGTC GAGCGGCTGC TCAGCGCCGG TGCCGACAGT 
GGCGACGGCG GGGGGCTGAC CCTGGAGCAG CTACGACAGG CCGGATTCGG CAATGGATGA 

 

Protein sequence

MFTGIVETCG RVAAIEHSGE GRILRIDAPR LGLAECRIGD SIAVDGACLT ATGIEDGQFR 
ADVSDETLRC TTLGGLRSGV RVNLERAVTP STPLGGHLVT GHVDGVGEVV ERAPAGGSER 
WRFRVPEGLA RYVAVKGSIA VAGVSLTINA VAGREFEVNL IPHTLDATNL GERRAGDPVN 
IEVDLVARYV ERLLSAGADS GDGGGLTLEQ LRQAGFGNG