| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_0393 |
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| Symbol | |
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| ID | 4711409 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | - |
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| Start bp | 458195 |
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| End bp | 459460 |
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| Gene Length | 1266 bp |
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| Protein Length | 421 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639854856 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001001989 |
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| Protein GI | 121997202 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.464327 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGAGCTG TCAATGCCAC CGGTTTCGCC ATCCTCGGCG CGGGGCTCAT CGCCATCGCC
TACGGGCTTG CGCGTTATGC GTACGGGTTG TTCGTCCCGT CGATTCGCTC GGAGCTCGGG
TTGTCCGCCG ACGCGGTCGG GGTCGTCGGA TCCATGGCCT TTATCAGCTT CTGCCTGGCC
AGCGTCGTGG CGCCACTGAT TGTCGACCGG CTCGGCGCAC GCTACTCGGC GGTGCTCTCC
GGTCTGTTTG CTTTGGCCGG GCTGACCCTG ATCAGCCAGG CCGGTGACGC GATCACCCTC
GGCGCCGGGG TGTTTGCCTG CGGGATCTGT ACCGGCCTGA TGATGCCGGC CCTGTCCTCC
GGCGTGCAGA CGAACATTCG TCCGGACCTC CGCGGCCGCG TCAACGCCGT CATGAATGCC
GGTACCAGTG CCGGCCTGAT CCTCTGCGTG CCCGCCGTGC TTCTGCTCAG CGGCGCGTGG
CGTATGGCCT ACGGCTCTTT CGCGGTGCTC GCGGCCCTGG GCATTGTCGC GGCCCTCCTC
CTGCTCCCTT CGGCCTCGAA GGTCGGTGGC GGAAAGGCCA AGCCGGCTCC CTTGCCGCTG
GATACTCAGC GGTGGCTGAC TGTCGGGCGG CTGACGGTGT TCTGCTTCGC CATGGGGGTG
GCCGGTTCGG CCTACTGGAT CTTCGCACCC GATTTGGTGG TCGAGATCGG CGGGCTGTCC
GAGCGGTTGA CCGGAATGCT CTGGCTCGTG GTCGGCATTG CCGGGCTCGC CGGCGCCTGG
GCGAGCGACC TCGGCGATCG GCTGGGGGCG CCTGCCACCC AGGCCATCGC GTTGGTGGCT
CTGGGGGCGG CGACGGCGCT GGTCGCCGCG GCACCGGGTG ACGTGTGGAT GGCACTGGTG
TCGGCCGCCG TGTTCGGTTG GGCCTTCATG ACCCTGACCG GGCTGTATCT GGTCACCGGC
ATCCGGCTGT TGCGCGAGCG CCCGTCCATG GGGCCGGTCG TGCCGTTCCT GGCCATCACC
GTCGGGCAGG CTGTCGGATC GCCCTTGGTC GGGTGGGCCA TCGGCAACGC GGGCTATGTG
GAGGCGTTCC TGATGTTCGC AACGCTGGCG GTTCTGATTG CGGCCTTTTC GTTCCTGTTC
CCCCGTCCTG CCAGCGACGC AGCGGATGAA GGGGGGGAGG GCGCGGCCGA GTCGCGGATG
GCCGCGGCCC CTGCCACGTC GAAGCGGGCT ATGCAGGATG GACAGTCCGA AACGGAATCC
ATCTGA
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| Protein sequence | MRAVNATGFA ILGAGLIAIA YGLARYAYGL FVPSIRSELG LSADAVGVVG SMAFISFCLA
SVVAPLIVDR LGARYSAVLS GLFALAGLTL ISQAGDAITL GAGVFACGIC TGLMMPALSS
GVQTNIRPDL RGRVNAVMNA GTSAGLILCV PAVLLLSGAW RMAYGSFAVL AALGIVAALL
LLPSASKVGG GKAKPAPLPL DTQRWLTVGR LTVFCFAMGV AGSAYWIFAP DLVVEIGGLS
ERLTGMLWLV VGIAGLAGAW ASDLGDRLGA PATQAIALVA LGAATALVAA APGDVWMALV
SAAVFGWAFM TLTGLYLVTG IRLLRERPSM GPVVPFLAIT VGQAVGSPLV GWAIGNAGYV
EAFLMFATLA VLIAAFSFLF PRPASDAADE GGEGAAESRM AAAPATSKRA MQDGQSETES
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