Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hhal_0297 |
Symbol | |
ID | 4711205 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhodospira halophila SL1 |
Kingdom | Bacteria |
Replicon accession | NC_008789 |
Strand | - |
Start bp | 333374 |
End bp | 334531 |
Gene Length | 1158 bp |
Protein Length | 385 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639854757 |
Product | lytic transglycosylase, catalytic |
Protein accession | YP_001001893 |
Protein GI | 121997106 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.277763 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATACGC GCCGTTGGGT CTTGTCGGCC CTGATCGGGA CGCTAGCTGT TCCTGGAGCC GTCCACGCTG GAGATGCCCT GGAGCAATTC CGGGAGCAGC AGCGGGAATC CTTTGACGAC TTCGCCACCG ATTTCCGCGA GCGCTACGCC GACTTCCGCG ACACCTTCCA CGAAGAGCTT GAGGCCTATC AGGAGGAGCT CTCCCAGCGC TGGGAAGAGC CGCGGGTCAG TGATCGCCGC GAGTGGGTTC AGTACGGCGA TGACCAGGCC TCCCGGACCG TCGTCGACTA CGCCCGGAAC GAGATTGTAG TGGATGTCCC AGGGGAGGGG CGGGAGGCTG TGCAGGCGGC CGCCCAGCGA CTGGATGAGC TGTTGCAGAC CACCTTGGCC GAAGCCTACG AGGGCGACGA GGTCACCCAG CGGACGTGGG ATCGACTGGA CATCCCCGAA AGCGAGACCA CCGCAGCCGG CAATTCCGAT GAGCAGCGGG TGCTCAGCGA GATCTCGGCC GAGGACGTCG AAGAGATGAT GGCCCAAGCC AAGGCGGAGC AGCGCCAGGA ACCGGAGGGC GATGGTCGAC GCGACATCCT TTCGTTCTCG GTCCCCATGC CCGAAAGTCG CGCCTCGGAC AAGGCCGAGG AGTTCCGCGA GGATGTGGAG GCGGAGGCGG AGCGCTACGA CGTGGATCCG GCGCTCATGC TCGCCGTGAT GCACAGCGAG AGCAGTTTCA ATCCCATGGC CCGTTCCCAT ATCCCTGCCT ACGGGCTGAT GCAGATCGTA CCTGAGTCGG CGGGCAGGGA CGTGGCGCAG CGGGTCTACG GCGAGCAGCG CCTGTTCTCT CCGGACTATC TCTATAATCC GGATAACAAC ATCCGCGCCG GCGCCGTCTA CCTCGACATC CTCGACAGTA GTTACCTGAG CGCCATCGAG GATCCCGAAA GCCGGCTTTA CGCCGTCATC TCCGCCTACA ACACCGGTGC CGGCAATGTG GCCCGGGCGT TTGTCGACGG CACCAACGTC TCGGCTGCCG CCGAGGTGAT CAACGACATG AGCCCGGACG AGGTCTACGA GACGCTGGCG GAGAACCTCC CCTACGAAGA GACGCGCAAC TACCTCGTCA ACGTCGCCAG TCGCCACCAG GCTTACCGGG ACTTCTAA
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Protein sequence | MDTRRWVLSA LIGTLAVPGA VHAGDALEQF REQQRESFDD FATDFRERYA DFRDTFHEEL EAYQEELSQR WEEPRVSDRR EWVQYGDDQA SRTVVDYARN EIVVDVPGEG REAVQAAAQR LDELLQTTLA EAYEGDEVTQ RTWDRLDIPE SETTAAGNSD EQRVLSEISA EDVEEMMAQA KAEQRQEPEG DGRRDILSFS VPMPESRASD KAEEFREDVE AEAERYDVDP ALMLAVMHSE SSFNPMARSH IPAYGLMQIV PESAGRDVAQ RVYGEQRLFS PDYLYNPDNN IRAGAVYLDI LDSSYLSAIE DPESRLYAVI SAYNTGAGNV ARAFVDGTNV SAAAEVINDM SPDEVYETLA ENLPYEETRN YLVNVASRHQ AYRDF
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