Gene Haur_4056 details

Gene Information

• Locus tag: Haur_4056
• ID: 5735914
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Herpetosiphon aurantiacus ATCC 23779
• Kingdom: Bacteria
• Replicon accession: NC_009972
• Strand: +
• Start bp: 5176037
• End bp: 5179441
• Gene Length: 3405 bp
• Protein Length: 1134 aa
• Translation table: 11
• GC content: 53%
• IMG OID: 641281207
• Product: hypothetical protein
• Protein accession: YP_001546816
• Protein GI: 159900569
• TIGRFAM ID: [TIGR01451] conserved repeat domain

Plasmid Coverage information

• Num covering plasmid clones: 4
• Plasmid unclonability p-value: 0.55653
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCACGGT TGGTGCTTCA ACTCGCTTTG CTCGCCGCAC TTATCGTTCG TTTTAATCTC 
CCCGCCGCGC AAGCGCAACC TCAAGCTTTT GTCGCTCCTG AAGAATTACA GGCTGTCGCC 
GATGATCAAT TTTGGAATAA TACAGGCTTG ATTGCTGGGG CAAATAACAC GATTCGCGCC 
ATCAGTTCGC AATCAGGCGA TTTATTTGTT GGTGGTTTGT TCGATCGCAT CGCTGGCATC 
AGTGCCAATC GGGTGGCTTT TTGGGATGGC GATCATTGGA ATACGATGGG CAGTGGGGTT 
AACGGCCCAG TCGATGATCT CGATGCTTCA ACTGGCGGTT CAGTTTATGT GGTTGGCTCC 
TTCAGCAGTG CTGGTGGAAT TGCCGCCGAT GGCATTGCTC GTTGGAATTC TGGCACAGGC 
CAATGGTCGG CCTTGGCGAC CAACGTCAAT GGAGCTGTTA CCGCCGTTTT GGTGCAACAG 
GTCGCTGGCA GTGATGTGGT GTATGTTGGT GGAACGTTTA GCTCAATTGA TGGGGTGAGT 
GCCAACCGTA TCGCTAAATT CAGCAATGGC TCATGGTCGG CATTAAGCAG TGGGATCGGC 
GGTGGCACTG CTCCCCAAGT GCTCGATTTA GCGATCAATC CGGCCAATGT CAACCAACTT 
GTGGCTGGGG GCACGTTTAG CTCGGCTGGT GGTAGCACTG CCAACAATGT AGCGATCTGG 
ACAGGCTCAG CTTGGCAGAG CCTTGGTACG GGTAGCAGCA ATGGGGTCAA CGGTGCTGTG 
CGTTTTGTTG ATTTCCGTGG CACAAATATG GTGGTCGTTG GTGGGAGTTT TAGCAATGCT 
GGCACTGTTA CCAATGTTGG TGGTGCAGCG GTTTGGACTG GTGGCAATAC CTGGGCAGCC 
ATGGCCGGAC GTGGGGTGAC TGGCGATGTG CGTGGGATTG TCGAGAACGC CAATTTTACC 
TATGTGATGG GCAATTTTGG CAGCGGTATC AACCCCAATG GCAATAGTGT TTTCTCGCCC 
AATATCGCCC GTTGGGATGG TAATATCTGG TCGCCTGTAC CGAATGCCAC CAATGCCTTT 
GGCACAAATG GGGCAATTTT ACGGGCTGAA CGCTTGGGCA GCGGCAGCGA TACCTTCTTT 
ATTGCTGGGG CGTTTGGCAC AGCCCATGGC ATGGAATTGA ATTTTGTGGG CATGGTTGTG 
CCACAACAGG GCTTCTTGCC TGGCGCAACT GATCGCTTTT TCCCCTTGGC TGGTGGCCTC 
GAAGGCTCCA ACGCCAAAGT TTTTGCCATT CAGCCACGTT CTGGCGAAAT TATTGCTGCT 
GGGCGCTTCG ATCTGGGCAG TAATCGCTTG CTCAATAATA TCGCTCGCTT TGATCCTGTT 
GATCGAGTCT GGTCGCCGTT GACTGGCTCC AGTGATAGTG GAGTCAACGA TGATGTGCGT 
GATCTTGCGT TGCGCAACAC CGATTTGATT GTTGTGGGTG AGTTTAGCAA GGCTGGTGGC 
ATTGATGCCG CAGGCGTAGC TAGTTGGAAT GGCACAACCT GGACTGCCCT CGCAACCAGC 
ATCAATGGTC GGGTCAACGC GGTTGCGATC AGTGGCAGCG ATATTTATAT TGGCGGCGAA 
TTTACGCTGA TTGATGGTGT GCCTGCCAAT CGGATTGCCC GTTTGAGTGG TGGTTCATGG 
CAAGCTGTCG GCGCTGGCAC TGATGGCCCT GTCAATAGTT TGTTGTTCAA ATCGAACCAA 
CTCTATGCTG GCGGCTTGTT TGCCAACGCT GGTGGTGCGC CTGCCAGCAA TCTTGCCCGC 
TGGAACGGCA CAACATGGCA AGCAATCGGG GTGGGCACTG ATGCCGAAGT GTTAGCTTTG 
GCCGATGTTA ATAGCACGAC TGTGGCAGTT GGTGGGCGGT TTACCAGTGC TGGTGGGGTT 
GCCAACACCC GCGCAGTTGC TCTGCTTAAC CACAGTAGTT TGGCATGGAC GGCGCTTGGC 
ACTGGCACTG ATGGCTATGT AACCAGCCTC GTCGTGCGCG GTGACGATTT GTATGCTGGT 
GGTTTGTTCA GCCGCATGGA TGGCTTGACG GTCAATCATG TGGCGCGGTG GAATGGCACA 
ACTTGGAATG CCTTGGGTAG TGGGGTTGCG GGTGGCAACC TGCAAAATAG CGAAGTTGGA 
GCCTTAGCGG TCAATGGCGA TAATCTGTAT GTTGGTGGAC GTTTTGATCG GGCTGGCGAT 
AAAGTTTCGC ATCGCTTTGC TGAATGGCGA CAACCCGAAG TTGATCTCAG CCTCAAACTG 
AGCGAATCGC CTGATCCGGT GACGATTGGC AATCCTATGA GCTATAAAGC CACCGTCAGC 
AATTTGGGCA CGATCAGCGC CAGCAGCGTC GTGTACGAAC AAACCTTTGC CAATACATTA 
GTTTTTGGTC AAGTTACAAC CTCGCAAGGC TCATGTAGTT TCCCCAATTC TACGACCTTA 
CGTTGTAATT TAGGTACGCT AGCGGCCAAT GCTAGTGCCA ATATCACAAT TAATGCTACG 
CCCAGCCAAG TTGGCACAAT TAGTAGCACG GGCACGGCTT CATCGCCTGC GAATGAGGCT 
TTTCCAAGCA ACAATAGTCG TAGCGTTGCA ACTCAAGTGA TTGTGCCTGG TAATCCAGTG 
CCAAGCATCA GCAACATCAC GCCTGATCGC TTTATTCGCC AGCCGATTGG CTTTCCACCG 
CCGCCAGCAG TGCGGATTAC AGTCAATGGC ACGGGCTTTG TGGCCAATTC CAAGGTTGTG 
GTAGCTGGGG TTGAGCGCAC GACAACCTTT ATCAATAGCA ATCGGCTGGA ATTTAGTATG 
GCCGCAACCA CCAGCCAAGG CACATACTCG GTTTTGGTGC GCAACCCCAC GCCAGGCGGC 
GGCGATTCCA ACAGCGTAAC CTTGGGGGTT TCGGTTGGCA TCGTTGGCTT GAGCAGCATC 
ACGCCCAACC TTGGTGGCAC TGATGTCGAT CTACAAACAA CCTTCAATGT AAGCTGGACG 
CATACCACCG ATCCATGGCG AATTATCGAG CACCTCGATT TGCGCTTGGT CGATAGCGAT 
GGTGTGGCTT TATGGGCACG CTTTACCGAA GGCGTTTCGG GCACATTTAG CCTGCTCGAT 
GCCAATGGCG ATGTGCTTGG TTATGCCACG GCTGGCAGCA GCGATCCATT GGAGAGCGAT 
AGCGCCATCC TCGATTTGGC GGATAGCAAC TTTGCTGGCA GCGGGCCGAC AGGCTTTAGC 
ATGCAAGTCA ATTTCAGCAT TCGCTTCAAA CCAAGTGCCG CTGGTCGTCG CTATAACATC 
GAGTTGTATG CCACCGATGA TCATGGCGGG GTACAAGGGC CAGATGTGAT GGGCACATTC 
ACCGTTGGCA TTCACGATGT ATATCTGCCA ATGACCATTA AATAG 

 

Protein sequence

MPRLVLQLAL LAALIVRFNL PAAQAQPQAF VAPEELQAVA DDQFWNNTGL IAGANNTIRA 
ISSQSGDLFV GGLFDRIAGI SANRVAFWDG DHWNTMGSGV NGPVDDLDAS TGGSVYVVGS 
FSSAGGIAAD GIARWNSGTG QWSALATNVN GAVTAVLVQQ VAGSDVVYVG GTFSSIDGVS 
ANRIAKFSNG SWSALSSGIG GGTAPQVLDL AINPANVNQL VAGGTFSSAG GSTANNVAIW 
TGSAWQSLGT GSSNGVNGAV RFVDFRGTNM VVVGGSFSNA GTVTNVGGAA VWTGGNTWAA 
MAGRGVTGDV RGIVENANFT YVMGNFGSGI NPNGNSVFSP NIARWDGNIW SPVPNATNAF 
GTNGAILRAE RLGSGSDTFF IAGAFGTAHG MELNFVGMVV PQQGFLPGAT DRFFPLAGGL 
EGSNAKVFAI QPRSGEIIAA GRFDLGSNRL LNNIARFDPV DRVWSPLTGS SDSGVNDDVR 
DLALRNTDLI VVGEFSKAGG IDAAGVASWN GTTWTALATS INGRVNAVAI SGSDIYIGGE 
FTLIDGVPAN RIARLSGGSW QAVGAGTDGP VNSLLFKSNQ LYAGGLFANA GGAPASNLAR 
WNGTTWQAIG VGTDAEVLAL ADVNSTTVAV GGRFTSAGGV ANTRAVALLN HSSLAWTALG 
TGTDGYVTSL VVRGDDLYAG GLFSRMDGLT VNHVARWNGT TWNALGSGVA GGNLQNSEVG 
ALAVNGDNLY VGGRFDRAGD KVSHRFAEWR QPEVDLSLKL SESPDPVTIG NPMSYKATVS 
NLGTISASSV VYEQTFANTL VFGQVTTSQG SCSFPNSTTL RCNLGTLAAN ASANITINAT 
PSQVGTISST GTASSPANEA FPSNNSRSVA TQVIVPGNPV PSISNITPDR FIRQPIGFPP 
PPAVRITVNG TGFVANSKVV VAGVERTTTF INSNRLEFSM AATTSQGTYS VLVRNPTPGG 
GDSNSVTLGV SVGIVGLSSI TPNLGGTDVD LQTTFNVSWT HTTDPWRIIE HLDLRLVDSD 
GVALWARFTE GVSGTFSLLD ANGDVLGYAT AGSSDPLESD SAILDLADSN FAGSGPTGFS 
MQVNFSIRFK PSAAGRRYNI ELYATDDHGG VQGPDVMGTF TVGIHDVYLP MTIK