Gene Haur_4007 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_4007 
Symbol 
ID5735868 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand- 
Start bp5114126 
End bp5114776 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content48% 
IMG OID641281157 
Productlipopolysaccharide biosynthesis protein 
Protein accessionYP_001546767 
Protein GI159900520 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3944] Capsular polysaccharide biosynthesis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTCGAC CTCAAGATTA TCTGGCGATG TTGCTACGGC GTTGGTGGGT GATTGTGCTG 
ATTGGTTTTG CCAGCGCAGC TGCTGCGTAT GGATTTAGCA AATTGCAAAC GCCCTTGTAT 
CGTGCCCAAA CCACCTACAA CGTGATTACC AGTCGTTACG ATCAAGGCTT GACAATGCAA 
TTGCCCAGTG TCATGGGTAA CTGGCCTGGC CAATTGACCG ATGCCCGTTT GCAAGAAATT 
AGCAACCAAT TGCAACTTGA TCGCACGCCC GATTATTTGC GTAAATATAT TGCGATCCAG 
CCGCAGCCCG ATCAATTGCT GCTGACGATC AACGTCGATT ATCCCGATGC CAAAAAAGCG 
GTTGTATTGG CCGATGCCTT GGGCGAAACG CTCAAAAGCG AAGTTGCTGG CTTGAATGCG 
CTGCGTTTGA GTACCGATGC AATTAATATT CGGGTACAGC AGCCAGCCAA ATATATTGAG 
TTAGCCTCGC CCAAAACCAA AATCAATGTG TTGGCGGGCG GTATTTTAGG CGGGATTATC 
GGTATTTTGG TGGCCTTTGC CCTAGAATAT TTCGACGATC GGATTAAATC CAACAACGAT 
ATTGAACGCT GGACTGGCCT ACCAACCTTG GGCAGCATTC CCGAATACTA A
 
Protein sequence
MLRPQDYLAM LLRRWWVIVL IGFASAAAAY GFSKLQTPLY RAQTTYNVIT SRYDQGLTMQ 
LPSVMGNWPG QLTDARLQEI SNQLQLDRTP DYLRKYIAIQ PQPDQLLLTI NVDYPDAKKA 
VVLADALGET LKSEVAGLNA LRLSTDAINI RVQQPAKYIE LASPKTKINV LAGGILGGII 
GILVAFALEY FDDRIKSNND IERWTGLPTL GSIPEY