| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_3708 |
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| Symbol | |
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| ID | 5735572 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | - |
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| Start bp | 4662731 |
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| End bp | 4664062 |
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| Gene Length | 1332 bp |
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| Protein Length | 443 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641280860 |
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| Product | protoheme IX farnesyltransferase |
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| Protein accession | YP_001546472 |
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| Protein GI | 159900225 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0109] Polyprenyltransferase (cytochrome oxidase assembly factor) |
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| TIGRFAM ID | [TIGR01473] protoheme IX farnesyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00051278 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGGCTC TTGCCACCCC TGAACAACAA AATGAGGTTA GCGCAGCCAT CAGCGAACGC
TTGCCTGCCA AACCTCGCGA TTCGTTCCGC CCAACGGCGG CGTTGACGGC GGTTTTTAGT
GCTTTAACAA CCATCAATAG CCTGTGGTGG GTTTTGAGTC CACAGCATAC GCTGGCTCCG
GTCTTGTTTG CCTGGTTGTT GCTAACAGCC TTGCTGGGCT TGGTCTCGTT GGTTGGCTCA
TCACGCGCTG CTCATCGGCC CATTCAATGG CTCACTTGGC TCGCCCAACC GCTGGGCATC
GCCGTGATTG CCTTGGTCAA TACCACCTAC GCCGATTGGG TTGGTTGGGC CAATTTGGCC
TGTTCGGTTG CTACGACCAT TATCACTGGT TTAGTCGCCT ATATGGCTTA CCACAGCGAC
ATCAGCACAC CCAAAGCCCA AGCCAACAGC AAATTGGCTG ATTTTCGGGT GTTGATGAAG
TTTCGGATTA TCTCGTTGCT GTTGTTGACC ACCTTGATTC CCATGTATTT GGCTAATGGC
GGCGAGTGGC CCAAATTCTA TATCGTCGTT TTGACCTTAC TTGGTGGTAC GTTGGCAGCT
GGTGGCGCTA ACGCGATCAA CATGTTCTAC GATCGTGATA TTGATGCAGT GATGAGCCGC
ACCAAAAAAC GCCCATTGCC CAATAATCGT CTAACTCAAT GGGAAGTTTT GGGCTTTGGC
CTGACCCTCA GCGTGTTGTC ATTTTTGGTG CTCTTGCCCG TTAATTTGTT AACGGCAATT
TTGGCAGTTA GCGGTATTTT CTACTATGTG GTGATTTATA CCATGTGGTT GAAGCGCACA
ACGGTGCAAA ATATCGTGAT CGGCGGCGCG GCGGGGGCGA TTCCGCCAAT GGTTGGTTGG
GCGGCTGGCA CTGATATTAA TTTATTTGTG GATAGCCCAA TTAAGTGGCT GCCCGCTGTG
TTTCTGTTTG CGATTGTGTT CTATTGGACA CCACCGCATT TTTGGGCTTT GGCAATTATT
CGCCGCGAAG ATTATGCCAA AGCTGGCGTG CCAATGTTGC CTGTGGTCAA GGGCGAAGCT
GAAACCCGCC GCCAAATTGT GCTCTACACC TTTATTATGA TTGCGCTTTC GTTTATGTTG
GTGTCGTTGC AAGTGGTTGG TTTGCTCTAC CTTGGCTTGG CGATGGTGCT TGGGGCAATC
TTCTTGTATT ACGCCGCCAA TATGATGCGC GACCATTCGC ATGCTGCGGC TTGGAAGCTC
TATCGCTATT CATTGCTCTA TCTGGCGCTG CTCTTTGTGG CCATGGGCAT CGACCGCGCT
TTGCTTGGCT AA
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| Protein sequence | MPALATPEQQ NEVSAAISER LPAKPRDSFR PTAALTAVFS ALTTINSLWW VLSPQHTLAP
VLFAWLLLTA LLGLVSLVGS SRAAHRPIQW LTWLAQPLGI AVIALVNTTY ADWVGWANLA
CSVATTIITG LVAYMAYHSD ISTPKAQANS KLADFRVLMK FRIISLLLLT TLIPMYLANG
GEWPKFYIVV LTLLGGTLAA GGANAINMFY DRDIDAVMSR TKKRPLPNNR LTQWEVLGFG
LTLSVLSFLV LLPVNLLTAI LAVSGIFYYV VIYTMWLKRT TVQNIVIGGA AGAIPPMVGW
AAGTDINLFV DSPIKWLPAV FLFAIVFYWT PPHFWALAII RREDYAKAGV PMLPVVKGEA
ETRRQIVLYT FIMIALSFML VSLQVVGLLY LGLAMVLGAI FLYYAANMMR DHSHAAAWKL
YRYSLLYLAL LFVAMGIDRA LLG
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