| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_3474 |
|---|
| Symbol | |
|---|
| ID | 5735335 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009972 |
|---|
| Strand | + |
|---|
| Start bp | 4377412 |
|---|
| End bp | 4377939 |
|---|
| Gene Length | 528 bp |
|---|
| Protein Length | 175 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 641280621 |
|---|
| Product | peptide deformylase |
|---|
| Protein accession | YP_001546238 |
|---|
| Protein GI | 159899991 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0242] N-formylmethionyl-tRNA deformylase |
|---|
| TIGRFAM ID | [TIGR00079] peptide deformylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.796462 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGTTG TACCACTGAT CGAGCTTGGA AATCCGTTGT TACGCCAGCC AGCAACTCCA
TTTGCCGACC CAACCAGCCC CGAAGTGGCC CGCATTTTGA ACGACATGCG CGATACCTTG
GCCGATATGC GACAACGAAT TGGCTATGGC CGAGGTATTG CCGCACCGCA AATTGGCGTG
CTCAAGCGCT TGATTTTGAT TGATACCCCC GACACCAATT TAGTGCTAGT CAACCCGCGT
TTTGAGCGCT GGAGCCGCGA GGAAGACGAA CGCTATGAAT CATGTTTTAG CTTTCCTGGC
ATTTGGGGTT TGGTGCAACG CCCACTTGGT GTAACTGTGG TCGCCTATAC GTTGGCGGGC
GAGGAGCAAC GCATCGAAGC GAGTGGCAGC CTCTCACGCA TTATTCAGCA CGAAATGGAT
CATCTTGATG GCTTTGTTTG GCTTGATCGT GGCCCTGATT TGCACAGCCT CTGCACCACC
CAAGAATATG AAAAACGCTA TATTAGCCGC GAACGCGAAT CACATTAA
|
|---|
| Protein sequence | MAVVPLIELG NPLLRQPATP FADPTSPEVA RILNDMRDTL ADMRQRIGYG RGIAAPQIGV
LKRLILIDTP DTNLVLVNPR FERWSREEDE RYESCFSFPG IWGLVQRPLG VTVVAYTLAG
EEQRIEASGS LSRIIQHEMD HLDGFVWLDR GPDLHSLCTT QEYEKRYISR ERESH
|
|---|
| |