| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_3179 |
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| Symbol | |
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| ID | 5735054 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | + |
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| Start bp | 4017007 |
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| End bp | 4020078 |
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| Gene Length | 3072 bp |
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| Protein Length | 1023 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641280325 |
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| Product | SMC domain-containing protein |
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| Protein accession | YP_001545944 |
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| Protein GI | 159899697 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0419] ATPase involved in DNA repair |
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| TIGRFAM ID | [TIGR00618] exonuclease SbcC |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0019664 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTGCCAG AGAAGCTGCG TGTTCGTAAT TTTATGTGTT ATCGCGATGA TGTTCCAACC
CTCGATTTCG AAGGAATTCG GGTTGCTTGT TTGTCGGGCG AAAATGGCGC TGGCAAATCG
GCCTTGCTCG ATGCAATCAC TTGGGCGCTT TGGGGCAAAG CTCGCGTTTC CTCCGATGAT
GAATTGATTG CGTTGGGTGC ACAAGAGATG GAAGTTGATT TGCAATTTAG CGTTGCCAAA
ACTTCCTATC GTGTGTTGCG CCGCCGTTCA TCAGCCAAAC GCGGCCAAAC CATCCTCGAA
ATTCAAGTTA ACGATGGTGA TAATTGGCGA GCAATTTCTG GCAATAGCAT CCGAGAAACC
CAAGAGATCA TTCATTCTGT GCTGCGCATG GAATACGATA CCTTCATTAA TAGTGCTTTT
TTGGTGCAAG GCAAAGCCGA TGAATTTACC CGCAAAGCGC CTGCTGAACG CAAACGAGTG
CTGGCCGAGA TTTTAGGTCT CGATGCCTAC GAACAACTTG AAGCCCGTGC CAAAGAGCAG
GTGCGCTATT TCAGCGACCG CGCTCAAGGC CTCGAAGGTA CAATCAGCAG CTACCGCGAA
TGGGTCAATA AGCGTGATTT TTACCTGAGC CAAGAGGCCG AAGCGCAACA ACGGGTGCAG
CAGCTTAGCC ATGAAATCGA ACGAGCAACA GTAGTGTTTG AGCAAGCCGA CCAACAACGC
CGCGCACTCG AACATCGTAA GGCCGAACGC GACCGCGAGC TAAGCCGCAG CCGCGACCTC
GAACGTCAAA TTGCCGAAAG CGATGGCGAT TATCGCCAAC TGGCTCAAGA TATTGGTGTG
GCACAAGCGA TGGTCGCTCG TCAAAGCGAA ATTGAAACCA ATTTTCAAGT CTTGCAAGCT
GCGCGTGAAG AGTTAGTGGT GCTTGATCGC TTGCGTGAGC AAATTGTCCA GCTCAACGAT
CAATACAAAG AGCAACGCGC TTTGGTCGAG CGCGAAGAAC TTTCGTTGCA ACATCAACTT
CAGCAATATC AGCGCGATCA GCAAACCAAC GCCGAATTGA TCGCCAATAA AGCCAGTAAG
CAAGCAGATT TGGCCGCCTT GGCCGAGCAA TTAGCCGGTT TTGCCGACGA TCAACGCCAT
TTAGAGCAAG CCCGCAGCCA GCGCAACGAG CTAGAGCAAC AAAGCACCAA CTTAACTCAA
TTGCAGGTTG AGGTGCAACG ATTGCAAGGC TTAATCAACG TGCGCGGCGA TTCGTTAATT
GCCGCACGCG AGGAGCAAAA TCGCCGAATT ATCGAGGCCG ACAATGTTTT GGCCAACGAA
TCGCGCTGGC GCAGTGAATT TGAAACCTCG GTTGCCCAAC AAAAAGCCCT GATTCGCGAT
GAACGCAAGC TCCAAGAAAT GCGCAGCCGC GACCAACAAG ATGCCAAGCA ATTGGGCGAA
CTATCGGCAC AAGAGAGCAA TTTAAAGCAA CTTGGCAAGC AAATTAACGA TAAAATCGAC
CAACTACGGG CAACCCACGA TACGCATTGC CCACTCTGCC AGAGCGATAT CGGCCAGCAT
GGCATTCATC AAGTGATCGA GCAATATATC GTTGAGCGCG ACGATCTGCG TGATCAATAT
CGTGAGGCCA GCCAAGCTCG CAAACAACTA AGCAATGAAT ATGATGCTCG CCAGCGCGAA
ATTCAAGGTT TAGAGCGCAA AGTTGCCCAG CTGAGCACTC TGGCAGCAGC AGTTGGTCGC
TTGGAAGGCC AAATCAGCGA AGCCCAAGAA CATCGTAGCA AACGCAGCGA AGCCGAAAGC
ACCTTGCGCG ATTTGAATCA GCGGCTTGAA CATGGCGATT TTGCCCATGA AGAACGCGCC
GCCTTAGCCC AAGCCCAAAC TGAAATCGCC GAATTAGGCC TTGATCAAGC GGCGCTTGAT
GCCCAACGCC AAGCCAATGG CCGATTAATC GCCCAGCTCG AGCAACGGCT AGCCCAACGT
GGCACAATCG AGGCCAAAGC CGCCGTACTC CAAGAACAAC TTGAGCGAAT TCAGGCGGCT
GAAACCCACA ATGCCACATT GCACGAAACA ATTTTGAGCT TGCAAGTCCA GATCGATAGT
CAGCAATTTG CCCAAACTGC ACGGCAACAG GCCGAGGCAA TTTACCAGCA AATGGCTGAA
TTGGGCTATG CCTCACAACG CCATCAAGAA GTGCGCGACG CGGTTGCCAG CCTTGGCCAT
TGGGAAGGCG AATATCATCA ATTGCGTTCG GCGCAAACCA ACTTGGCAAC CAACCAACGC
CAAGCCCAGC GTTTGGCCGA ATTGATCGAG CGCCAACGCC AAGATTTAGC CCAAATTCAA
GTAATGCTCA ATCAACTCAA CCAAGAATTA GCCCAATTGC CAGCCGCTAT TCAAGCTGCC
GAAACCGCTC AACGCACAAT CAACGAGTTT CGCGGGCGCT TGGCCGTTGC TCAAAAAGAT
TTGGGTGCAG CTCAGCAAAA CGTCCAGCAT GTGGCTCAAG TCGCTGAGCA GTTGGCCGCA
GCCGAAAAAG AGCTGCTCTC AGTGCAAGAT CAACGCGATG TTCACAGCGA ATTGGTACGA
GCTTTTGGCA AAAAAGGCAT TCAAGCAATG CTGATCGAAA CGGCGATTCC TGAGCTTGAG
CGCGAAGCTA ACGAATTGCT CAGCCGCATG ACCGACAACC AAATGCACTT GCGCTTTGAA
ACCCAACGCG AAACAAAAAA AGGCGATACC AGCGAAACTC TCGATATTCA AATTGCCGAT
GAACAAGGCA CGCGCCGCTA CGATTTGTAT AGCGGTGGCG AGGCCTTCCG CATCAACTTT
GCAATTCGGA TTGCCATGAG CAAAATGCTG GCTCGTCGCG CCGGAGCCAA CTTGCAAACA
TTAATTATTG ACGAAGGCTT TGGTTCGCAA GATGGTCGTG GGCGCGAACG CTTGGTCGAG
GCTATCACCC AAGTTCAGCC AGATTTCAGT CGCATCTTGG TAATCACCCA CATCCAAGAA
TTGAAGGATC AATTTCCGGT GCAGATCGAA ATTACCAAAC ACGACAACGG CTCACGTTGG
GCGGTGAATT AG
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| Protein sequence | MLPEKLRVRN FMCYRDDVPT LDFEGIRVAC LSGENGAGKS ALLDAITWAL WGKARVSSDD
ELIALGAQEM EVDLQFSVAK TSYRVLRRRS SAKRGQTILE IQVNDGDNWR AISGNSIRET
QEIIHSVLRM EYDTFINSAF LVQGKADEFT RKAPAERKRV LAEILGLDAY EQLEARAKEQ
VRYFSDRAQG LEGTISSYRE WVNKRDFYLS QEAEAQQRVQ QLSHEIERAT VVFEQADQQR
RALEHRKAER DRELSRSRDL ERQIAESDGD YRQLAQDIGV AQAMVARQSE IETNFQVLQA
AREELVVLDR LREQIVQLND QYKEQRALVE REELSLQHQL QQYQRDQQTN AELIANKASK
QADLAALAEQ LAGFADDQRH LEQARSQRNE LEQQSTNLTQ LQVEVQRLQG LINVRGDSLI
AAREEQNRRI IEADNVLANE SRWRSEFETS VAQQKALIRD ERKLQEMRSR DQQDAKQLGE
LSAQESNLKQ LGKQINDKID QLRATHDTHC PLCQSDIGQH GIHQVIEQYI VERDDLRDQY
REASQARKQL SNEYDARQRE IQGLERKVAQ LSTLAAAVGR LEGQISEAQE HRSKRSEAES
TLRDLNQRLE HGDFAHEERA ALAQAQTEIA ELGLDQAALD AQRQANGRLI AQLEQRLAQR
GTIEAKAAVL QEQLERIQAA ETHNATLHET ILSLQVQIDS QQFAQTARQQ AEAIYQQMAE
LGYASQRHQE VRDAVASLGH WEGEYHQLRS AQTNLATNQR QAQRLAELIE RQRQDLAQIQ
VMLNQLNQEL AQLPAAIQAA ETAQRTINEF RGRLAVAQKD LGAAQQNVQH VAQVAEQLAA
AEKELLSVQD QRDVHSELVR AFGKKGIQAM LIETAIPELE REANELLSRM TDNQMHLRFE
TQRETKKGDT SETLDIQIAD EQGTRRYDLY SGGEAFRINF AIRIAMSKML ARRAGANLQT
LIIDEGFGSQ DGRGRERLVE AITQVQPDFS RILVITHIQE LKDQFPVQIE ITKHDNGSRW
AVN
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