| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_0788 |
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| Symbol | |
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| ID | 5732672 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | - |
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| Start bp | 889415 |
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| End bp | 891352 |
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| Gene Length | 1938 bp |
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| Protein Length | 645 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641277918 |
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| Product | LVIVD repeat-containing protein |
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| Protein accession | YP_001543564 |
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| Protein GI | 159897317 |
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| COG category | [S] Function unknown |
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| COG ID | [COG5276] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0658316 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGTTCGTC GTTTTTTTCG TTGTAGTTTG CTGCTGATGC TGGCCGTTGG AGCAATCGCT
AGCCAGCATG CCACCCCGCT GGCCGCCCAA AGCCCTCAGT CAAGCCCAAG CCAATTGGCA
ATTCGTGGTC AACTTGGCGG TGATAGCTCA ACCATGGTCG TTGCCGAACA AGCTGCTTAT
GTTGGCATCG GTCCACGGGT CGTAACCTAC GATTTGCACA ATCCCAATCA GCCAAATCTA
GCCAACCAAA GCAGCCTTTT ACCCGCCACC GTGCAAGATT TGGCCTTAGG CGAGGGCTAT
TTGTACGCCG CCTTGGGCTA TGGCCGTGAA CATGGCTTGG CTACATTTTC CTTAGCCACT
CCATTAACAC CAACGCTTGT AAGTTTTTAC CCGCTTGAAT TATCGGCCAT GAGTGTTTTC
AGCTATCAAG ATTATGTCTA TGTGCAAGTT GATGATGGCT TGCAGGTGTT CGATTTGAGC
AATCCTAGCC AACCACAATT GGTCAATCAA CTTAATCAAT ATGGCATTGC CGCCGCAACG
GTTCAAGGCG ATCATGTGTA TCTCAATATT CAATCGTGGC TTTCGGGCTT CGATAGCTTG
AATATCGTCG ATTTGAGCAC ACCCATGACT CCAACGCTCA AAGGTTCGAT CGTGCTTGGC
GATATTTTAG ATATCGAAAT TGCCGCTAAT TATGCGTATG TCAATACTCA AATGGGCCTG
CGGGTGGTTG ATATCAGCAA TGGCAGCAAC CCAAACATTA TCAACCAAAC CGATGATGTT
GCTGGATTAC AACTAACCGC AAGTGGCAAC ACACTCACAA TGATTGGGCT AGATTATGCC
TTACACACGT GGGATATTAC CAACCCAATC ACGCCGACCG AAATTGCTGC CAGCTCCGAA
ACGGTGCTTG GCTGGCCAAC AGCCTTAATT GCCCAACAAA ACCTTGGCTA TGTGCTGACT
CGTTCAGGCC AAATTAATGT CTTCGATTGG AGCACTCGCC AAGCTCCCAC GCGCATCAGT
GCGACTGAAA CCCCTGGCTG CAAGGAAAAT GTAGCCTTGC AAGTGGTTGG CGATTATGCC
TATGTGGCCG ATTGGGGCCG TGGTTTGTGC ATTGTTGATG TGCGCAATCC CCAACAACCA
AGCGTGATTG GCCGCTTCGA TTTAACCACC GATCGCAACG CCGTCACCGA TATTGCCGTC
CAAGGCTCGT TGGTATATAT GGTCGATTGG AGCCACGGAA TTTATGTGAT CGATGTCAGC
GACCCAACCG AACCAACTCA AGTCAGTTTC TTTGCAACCG CTGGCTTTCC AGCAGCAATT
GCGGTCAATG GCCCGATGGT CTATGTTGGC GAATCGATCA ACGATCAAGG CGTTGGTGGC
AGTGTACGGA TTTTCGATCT CAGCGATTTG GCCAATCCAG TTGAGCATAG TCAGTTCTAC
ACCAGCAAAG TCGCCCAATT AGCCGTGATC GATCAAACCG TGTATGTGGC CGACAACGAA
GGCGGCCTGC GGATTCTCGA TGTTAGCAAT CCTGATAACA TTCAGATGAT CGGCCAATAT
GCTGAAAATT GGTTCGCCAT GGATTTAGCG ATTCAGGATG AGTATGTGTA TTTGGCGACG
ACTAGCGGCT TAGAAATTGT CGATATCAGC AACCCCAGCC AACCAATCCC AGCAGGCCGC
CTTGGCGATC GCTTGATTGA TGGCATCGTT GTGGCGGGCG ATAATGCGTA TATTGGTGAA
AATGGTAGCA TTCGCCAAAT CGATATCAGC CAACCGAGCA ACCCTCAAGT TGTAGCCGAA
ACCCTGCTAG CTCGCGATTC ATGGATTCTA CCAGCGCTGC ATGGTGGAGA GATTGTAGGC
TTGAGCTATC ATGGTGGTGG CATGTTCGTA CTTGAGCCAG AATATCAATT ATTTTTGCCT
GTAATCAGCA AAAACTAA
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| Protein sequence | MVRRFFRCSL LLMLAVGAIA SQHATPLAAQ SPQSSPSQLA IRGQLGGDSS TMVVAEQAAY
VGIGPRVVTY DLHNPNQPNL ANQSSLLPAT VQDLALGEGY LYAALGYGRE HGLATFSLAT
PLTPTLVSFY PLELSAMSVF SYQDYVYVQV DDGLQVFDLS NPSQPQLVNQ LNQYGIAAAT
VQGDHVYLNI QSWLSGFDSL NIVDLSTPMT PTLKGSIVLG DILDIEIAAN YAYVNTQMGL
RVVDISNGSN PNIINQTDDV AGLQLTASGN TLTMIGLDYA LHTWDITNPI TPTEIAASSE
TVLGWPTALI AQQNLGYVLT RSGQINVFDW STRQAPTRIS ATETPGCKEN VALQVVGDYA
YVADWGRGLC IVDVRNPQQP SVIGRFDLTT DRNAVTDIAV QGSLVYMVDW SHGIYVIDVS
DPTEPTQVSF FATAGFPAAI AVNGPMVYVG ESINDQGVGG SVRIFDLSDL ANPVEHSQFY
TSKVAQLAVI DQTVYVADNE GGLRILDVSN PDNIQMIGQY AENWFAMDLA IQDEYVYLAT
TSGLEIVDIS NPSQPIPAGR LGDRLIDGIV VAGDNAYIGE NGSIRQIDIS QPSNPQVVAE
TLLARDSWIL PALHGGEIVG LSYHGGGMFV LEPEYQLFLP VISKN
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