Gene Haur_0716 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_0716 
Symbol 
ID5732631 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand- 
Start bp822171 
End bp822818 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content49% 
IMG OID641277846 
ProductTetR family transcriptional regulator 
Protein accessionYP_001543492 
Protein GI159897245 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.0418191 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCATTG ACTTATCGTT CCAACATATG CTATACTTCG CTGTAAGCAG GAGTATGAGA 
CGACTTATGG CAGGCAAGAA AGCATTTGAG CCTCAACGGG TTCTCGAAAA AGCCATGAAC 
GCCTTTTGGG AACGTGGGTA CGAAGGGCTA TCAATCGAAG ATCTCGTCCA AGTTACGGGA 
ATCGGGCGCG GTAGCCTCTA TGGAACGTTT GGCGATAAAC ATGCGCTGTA CCTAGCGGCG 
CTTAATCAGT ATACTGCCGC TATTAAAGCC CAAACTATGA CTATTTTGGC GCAAACTGGC 
TCACTCCAAG TTGTATTAGG CCAGCTTTTC CAAGCCCAGG TTGATGCTTT GCTGCACGAC 
CCAGCGCGGC GTGGCTGTTT TTTGGTTAAT GCATCCTTAG AAATAGCTCC ACATGATCAT 
GCGGTTAACG GGATTATCCA GTCGGCATTG AATGAGTTCG AAGAAGCACT CTATCGACTG 
CTGATCAAAG CGCAGGTTGC AGGTGAGCTC TCGTGGCAAC ACGATCCCCA TCAATTGGCG 
CATTTCTTGG TAGCAACCTT TGTCAGCCTG CGCGTGCTAG CGCGGAGCCA ACAACAGCGG 
GGAATGCTCG ACGATATCGT GAAAACAGCT TTATCGATTT TCAACTAA
 
Protein sequence
MIIDLSFQHM LYFAVSRSMR RLMAGKKAFE PQRVLEKAMN AFWERGYEGL SIEDLVQVTG 
IGRGSLYGTF GDKHALYLAA LNQYTAAIKA QTMTILAQTG SLQVVLGQLF QAQVDALLHD 
PARRGCFLVN ASLEIAPHDH AVNGIIQSAL NEFEEALYRL LIKAQVAGEL SWQHDPHQLA 
HFLVATFVSL RVLARSQQQR GMLDDIVKTA LSIFN