Gene HY04AAS1_1376 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHY04AAS1_1376 
Symbol 
ID6744201 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHydrogenobaculum sp. Y04AAS1 
KingdomBacteria 
Replicon accessionNC_011126 
Strand- 
Start bp1289426 
End bp1290100 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content39% 
IMG OID642751193 
Productflagellar L-ring protein 
Protein accessionYP_002122039 
Protein GI195953749 
COG category[N] Cell motility 
COG ID[COG2063] Flagellar basal body L-ring protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones70 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGTTTA AAAAGTTTGT TTTTTTAGCT TTTAACGTTA CAATGCTTAG TTTATTACTA 
AATAGTTGTG CTTCAACACC TCATCACCTA AAATACTTAC CCTATTCAAC ACCATCTCAA 
AACCTAAACT ATGTGAAAGG TAGCCTGTAC GTACCAGATA GTCCTATGGC TAATCTTTAT 
AGCGACCAAA GGGCTTTTGC GGTCGGGGAT TTAGTACACA TCCTTGTTTC AGAAAGCGTA 
AACGCCGTAG AAAGTATATC AAACCAAACC CAACGTTCAA GTACCTTCAA CGATGCAGTG 
TCATCGTTTT TTGGACTTCC TTCAAGCACT CTTAGAAATT TAGGGGTTGG AGCAAGCTCA 
AACAACCAGC AGAAAGCTCA AGGCACAGAA AGCCAGAGTG GGGTTTTTAC TACTACTATT 
ACAGCTTATG TAAAAAGAGT TTACCCAAAC GGCAACCTTC TAATAGAGGG TCATAAAATC 
ATATACCTAA ACAACGTAGA AAGGGTAATT ACGCTAAGGG GCATCGTAAG ACCTCAAGAC 
ATAGACAACA CAGATACCGT CCCAAGCCAG GATATAGCAA ACTTAGAGAT CTTATATCAA 
GGTCATGGTT ATCTAGTGAA TGGCTCTCAA CCAGGATGGC TAGCTAGATT CTTAGCTAAA 
ATTCTCCCAT TTTAA
 
Protein sequence
MKFKKFVFLA FNVTMLSLLL NSCASTPHHL KYLPYSTPSQ NLNYVKGSLY VPDSPMANLY 
SDQRAFAVGD LVHILVSESV NAVESISNQT QRSSTFNDAV SSFFGLPSST LRNLGVGASS 
NNQQKAQGTE SQSGVFTTTI TAYVKRVYPN GNLLIEGHKI IYLNNVERVI TLRGIVRPQD 
IDNTDTVPSQ DIANLEILYQ GHGYLVNGSQ PGWLARFLAK ILPF