Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HS_1274 |
Symbol | |
ID | 4240785 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haemophilus somnus 129PT |
Kingdom | Bacteria |
Replicon accession | NC_008309 |
Strand | + |
Start bp | 1461605 |
End bp | 1462399 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 638104847 |
Product | ABC transporter, ATP-binding protein |
Protein accession | YP_719486 |
Protein GI | 113461417 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4608] ABC-type oligopeptide transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTTAAAAA AACAACCAAT CATTGAATTA CAAGATATTG TGGTGCAATT TCCTTCCCGT GATGGTTCAA TATTTAATCC GAAAAAATTT ACTGCTATAG ATGGTATTAG CCTAAATATT CAGGCCGGAG AAACTTTGGG TTTAGTGGGA CAATCAGGTT GCGGTAAATC AACGCTTGCC AATGTTATGA TTGGTTTACA AAAACCCTCT TCCGGCACAG TAAAATTTAA CGGTTTAAAG ATGAAATACG GAAGTGCAGA GGCTCGCAAA CAATTCGGAC GACAAGTTTC AGTGATTTTT CAAGATCCTG CCACCGCACT TAATCCAAGA ATGCGAGTAA TAGATATATT AAAAGATCCA ATGAATATCC ATAATGTACT GCACCCCCAT GAACGTGAAA AACGGGTGTA TGAACTTCTT TTCCGAGTGG GATTACCTCG CTCTGCAGCA TTGGTTGAAC CTACACGACT GTCGGGTGGA CAAAAACAAC GAGTTGCTAT TGCTCGTGCA TTGGCATTAA ACCCAAAGTT AATCGTAGCG GATGAACCTA CTTCTGCCCT TGATGTGTCT GTACGGGCTC AAGTGTTAAA TTTACTTGCC GATCTTAAAA AAGAGTTAAA TCTCGCAATG GTGTTTATCT CTCATGATTT ACAAACTGTT CGTCAAGTAT CTGATCGTAT TGTGGTGATG AATGGAGGCT TGATTGTAGA ACAAGGTGAT GCAATGGACG TTTTTAATAA TCCGCAACAG GAATATACCA AAATTTTACT CAATGCAGCA CCATCATTAT TGTAG
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Protein sequence | MLKKQPIIEL QDIVVQFPSR DGSIFNPKKF TAIDGISLNI QAGETLGLVG QSGCGKSTLA NVMIGLQKPS SGTVKFNGLK MKYGSAEARK QFGRQVSVIF QDPATALNPR MRVIDILKDP MNIHNVLHPH EREKRVYELL FRVGLPRSAA LVEPTRLSGG QKQRVAIARA LALNPKLIVA DEPTSALDVS VRAQVLNLLA DLKKELNLAM VFISHDLQTV RQVSDRIVVM NGGLIVEQGD AMDVFNNPQQ EYTKILLNAA PSLL
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