Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HS_0794 |
Symbol | xylR |
ID | 4240285 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haemophilus somnus 129PT |
Kingdom | Bacteria |
Replicon accession | NC_008309 |
Strand | + |
Start bp | 864058 |
End bp | 865221 |
Gene Length | 1164 bp |
Protein Length | 387 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 638104348 |
Product | AraC family transcriptional regulator |
Protein accession | YP_719004 |
Protein GI | 113460937 |
COG category | [K] Transcription |
COG ID | [COG1609] Transcriptional regulators [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATAACA TACAAAAATA TTACCGCATT GCTTTATTGT TCAACGCCAA TAAGGTGTAT GATAGAGAGG TGGTGGCTGG TATTGGACAG TATATTCAAG CATCGCAATG CACATGGAAT ATTTTTGTGG AAGATGATTT TGTTTACCAT AAAGAAACCA TTGAACGACT GTCTATTGAT GGTATTATTG CAGACTTTGA CGATCCTGAA ACCGTTTCCT TGTTGAAAAA TATTGATGTT CCCACTATTG CGGTAGGGGG ATCTTATCAG AATTTTGCTG ATTATCCGCA CTTCCCTTAT GTCGCTACTG ATAATTACGC TTTAGTCGAA ACCGCTTTTT CCCATTTAAA ACATAAAGGA ATTAGTCAAT TTGCCTTCTA TGGTTTGCTG ACTCAAGGCA CTCGGCATTG GGCAAATGAG CGGAAAAATG CTTTTGTAGA TTTAATGGAA AAATATGCTT ATCAATTTTC TGTATATTTA GGTGATAAAA CTGATTCAGG CAGTTGGCAA GTGGCACAAT CGGAATTATG CCAATGGCTA CAAACATTGC CGGCACATAC CGGCATTATT GCAGTAACGG ATGCAAGGGC AAGGCATTTA TTACAAGCCT GCGAATATTT GAAAATAGCC GTTCCTGAGA AACTTTGTGT GATTGGTATT GATAACGAAG AATTGATCCA ATATTTATCT CGCATTTCTC TATCGTCTGT TGCTCAAGGT ACCAAACAAA TTGGTTATCA AGCAGCGAAA ATGTTGCATA GTCTGTTAAG TGGACATAAA GTGAGATTAC AACCAATTTT AATTCCTCCC TTAAAAGTAG AAGAACGGGC TTCTACGGAT TACCGTTCTT TGCGTGATCC TTTTGTGATT CAAGCAATGC ATTATATTCG CCAACGAGCC TGTCATGGTA TTAAAACAGA GCAAGTATTG GATTATTTAA AAATTTCCCG TTCTAACTTG GAACAACGTT TCAAATTGGA ATTAAACAAA ACCGTTCATC AAATTATTCA TGAAGAAAAA CTTAACCGAG CCGTGTATTT ACTTCGCTTT ACCGATATTT CTATGCCAGA AATTGCTGAA ATCTGCGGTT ATCCTTCTTT GCAATATTTT TATGCAGTAA TGAAGAAAGC CTATGGGATA ACCCCAAAGG CTTTTCGTCG ATAA
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Protein sequence | MDNIQKYYRI ALLFNANKVY DREVVAGIGQ YIQASQCTWN IFVEDDFVYH KETIERLSID GIIADFDDPE TVSLLKNIDV PTIAVGGSYQ NFADYPHFPY VATDNYALVE TAFSHLKHKG ISQFAFYGLL TQGTRHWANE RKNAFVDLME KYAYQFSVYL GDKTDSGSWQ VAQSELCQWL QTLPAHTGII AVTDARARHL LQACEYLKIA VPEKLCVIGI DNEELIQYLS RISLSSVAQG TKQIGYQAAK MLHSLLSGHK VRLQPILIPP LKVEERASTD YRSLRDPFVI QAMHYIRQRA CHGIKTEQVL DYLKISRSNL EQRFKLELNK TVHQIIHEEK LNRAVYLLRF TDISMPEIAE ICGYPSLQYF YAVMKKAYGI TPKAFRR
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