23 homologs were found in PanDaTox collection
for query gene HS_0201 on replicon NC_008309
Organism: Haemophilus somnus 129PT



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008309  HS_0201  oxaloacetate decarboxylase subunit gamma  100 
 
 
85 aa  171  3.9999999999999995e-42  Haemophilus somnus 129PT  Bacteria  normal  0.41736  n/a   
 
 
-
 
NC_011205  SeD_A3713  oxaloacetate decarboxylase subunit gamma  51.25 
 
 
80 aa  70.1  0.00000000001  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal 
 
 
-
 
NC_011149  SeAg_B3544  oxaloacetate decarboxylase subunit gamma  50 
 
 
80 aa  67.8  0.00000000005  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_011094  SeSA_A3545  oxaloacetate decarboxylase subunit gamma  48.75 
 
 
80 aa  67.8  0.00000000005  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal 
 
 
-
 
NC_011205  SeD_A0061  oxaloacetate decarboxylase subunit gamma  52.05 
 
 
79 aa  67.4  0.00000000007  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.979623  normal  0.547366 
 
 
-
 
NC_011080  SNSL254_A0061  oxaloacetate decarboxylase subunit gamma  52.05 
 
 
79 aa  67.4  0.00000000007  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal  0.493404 
 
 
-
 
NC_011094  SeSA_A0062  oxaloacetate decarboxylase subunit gamma  52.05 
 
 
79 aa  67.4  0.00000000007  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal 
 
 
-
 
NC_011080  SNSL254_A3616  oxaloacetate decarboxylase subunit gamma  49.37 
 
 
80 aa  61.2  0.000000005  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  0.384488  normal 
 
 
-
 
NC_011149  SeAg_B0063  oxaloacetate decarboxylase subunit gamma  50 
 
 
79 aa  58.5  0.00000003  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_011083  SeHA_C0893  oxaloacetate decarboxylase subunit gamma  47.69 
 
 
68 aa  55.5  0.0000002  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal 
 
 
-
 
NC_011083  SeHA_C3651  oxaloacetate decarboxylase subunit gamma  47.89 
 
 
80 aa  55.1  0.0000003  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal 
 
 
-
 
NC_011083  SeHA_C0060  oxaloacetate decarboxylase subunit gamma  50 
 
 
79 aa  54.7  0.0000005  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.130142  normal 
 
 
-
 
NC_011205  SeD_A0861  oxaloacetate decarboxylase subunit gamma  46.97 
 
 
69 aa  54.3  0.0000005  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal 
 
 
-
 
NC_011149  SeAg_B0802  oxaloacetate decarboxylase subunit gamma  46.97 
 
 
69 aa  54.3  0.0000006  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_0970  sodium pump decarboxylases, gamma subunit  39.02 
 
 
83 aa  53.9  0.0000008  Marinobacter aquaeolei VT8  Bacteria  normal  0.134882  n/a   
 
 
-
 
NC_011080  SNSL254_A0830  oxaloacetate decarboxylase subunit gamma  46.15 
 
 
68 aa  53.1  0.000001  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_3624  sodium pump decarboxylase, gamma subunit  35.8 
 
 
83 aa  51.2  0.000005  Marinomonas sp. MWYL1  Bacteria  hitchhiker  0.0000194054  decreased coverage  0.0000000418029 
 
 
-
 
NC_009457  VC0395_A0321  putative oxaloacetate decarboxylase, gamma subunit  34.38 
 
 
112 aa  49.7  0.00001  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_007963  Csal_0692  sodium pump decarboxylase, gamma subunit  36.59 
 
 
80 aa  47.4  0.00006  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_013456  VEA_002524  oxaloacetate decarboxylase gamma chain  34.09 
 
 
85 aa  44.3  0.0006  Vibrio sp. Ex25  Bacteria  normal  0.0628389  n/a   
 
 
-
 
NC_009439  Pmen_2894  sodium pump decarboxylase, gamma subunit  36.47 
 
 
98 aa  43.9  0.0008  Pseudomonas mendocina ymp  Bacteria  normal  0.11111  normal  0.988078 
 
 
-
 
NC_011312  VSAL_I0638  oxaloacetate decarboxylase subunit gamma  37.5 
 
 
83 aa  43.9  0.0008  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.471241  n/a   
 
 
-
 
NC_009783  VIBHAR_03492  oxaloacetate decarboxylase subunit gamma  34.88 
 
 
92 aa  41.6  0.004  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>