Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HS_0031 |
Symbol | |
ID | 4239539 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haemophilus somnus 129PT |
Kingdom | Bacteria |
Replicon accession | NC_008309 |
Strand | + |
Start bp | 32278 |
End bp | 33753 |
Gene Length | 1476 bp |
Protein Length | 491 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 638103562 |
Product | sugar ABC transporter, ATP-binding |
Protein accession | YP_718237 |
Protein GI | 113460180 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAAATA TCAATAAGAC ATTCCACGGT GTAAAAGCCT TAAATCGAGT TAACCTCTCT TTAGATTATG GAGAAGCTCT CTGCCTTGCC GGTCAAAACG GTTGTGGAAA ATCCACGCTA ATCAAAATCC TCTCAGGTGT TTATCAACCA GATAAAGGGG CTGAAATTCA AATTGGTGCG AGCAAATATA CCAAACTGAC GCCACAAGCT TCTATTGAAC AGGGAATTCA AGTAATCTAT CAAGATTTAG CCCTTTTTCC TAATTTAACT GTCGCTGAAA ATATTGCAAT AAATTTACAT CGAAAATTAG GTTGGGTCAG CCAATCAGAA ATTCATCAAG TTGCATTAAA CGCAATACTA AGCATTAATG CAGATTTAGA TCTCAATGCT ATTTTAGAAG ATTTACCAAT TGCACAGCAA CAATTAGTCG CTATTTGTAG AGCGCTTGCA CAAAATGCTC GACTGTTAAT TATGGATGAG CCAACAGCAT CTCTTACTGC GAAAGAAGTA CAAGATCTGC TAAAAGTTGT ACTCAAGTTA AAAAGTAAAG GCATTAGTAT TATTTTTGTC AGTCATAAAT TACAAGAAGT AATGAGTGTC TCTGATACCG TTTTAGTACT TAAAAATGGG AATATGGTTG GACAATACCC TATTAGTGAA ATGGATGAAA AACGCTTAGG ATTCTTAATG ACAGGCTTGG AAATTGACTA TAAACGGTTA GATTTGCCCG ATTTTTCGCA AAATAGAACC GTTTTAGAAG TTCAAAATTT AACTCTGCCT AACCAGTATG AATCCATTAA TTTCTCATTA AGAGAAGGAG AAATTATTGC CTTGACCGGT TTACTCGGCT CAGGTCGGAC GGAACTGTGC CTTAGCTTAT TTGGAATCAC TCAACCTAAA TCAGGTGATA TACTATTAAA TGGTGAGAAG GTTATATTTC AAAACAACCG TGATGCTATC AAACAAGGAA TTGCTTATGT TTCTGAAGAT AGAATGACAA CTGGTTTAAT TATGACTGAA TCCATACATC ATAATATTAT CTCTACTATT TTTCATAAAA TCACCGATAA ATTTAACATT ATAAAATCAT CAAAAGCCTA TAATTATAGC CAGGAATTAA TTGAATCTTT AAAAATTAAA GTAACGGATT CAGATTTGCC AGTAAATACA CTTTCCGGTG GGAATGCCCA GCGGGTGTCT ATCGCAAAAT GGTTAGCAAT AGATCCTAGA ATTATTATTT TAGATGCTCC AACCATTGGG GTAGATATTG CGAATAAGGA AGGAATATTC CAAATTATTC GCACATTAGC ACAAAAAGGT ATCGCTGTTA TTTTTGTGAC CGATGAGGTA GAAGAAGCAT ACTACAACAG TCACAAAGTC ATAGTAATGA AAAAAGGTAA AATTGTAGGT GAGATATTAC CTATCTATAC CACAGAAAAA TCAATTGCGG AGGTTGTTTA TGAAAATCAC CAATAA
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Protein sequence | MQNINKTFHG VKALNRVNLS LDYGEALCLA GQNGCGKSTL IKILSGVYQP DKGAEIQIGA SKYTKLTPQA SIEQGIQVIY QDLALFPNLT VAENIAINLH RKLGWVSQSE IHQVALNAIL SINADLDLNA ILEDLPIAQQ QLVAICRALA QNARLLIMDE PTASLTAKEV QDLLKVVLKL KSKGISIIFV SHKLQEVMSV SDTVLVLKNG NMVGQYPISE MDEKRLGFLM TGLEIDYKRL DLPDFSQNRT VLEVQNLTLP NQYESINFSL REGEIIALTG LLGSGRTELC LSLFGITQPK SGDILLNGEK VIFQNNRDAI KQGIAYVSED RMTTGLIMTE SIHHNIISTI FHKITDKFNI IKSSKAYNYS QELIESLKIK VTDSDLPVNT LSGGNAQRVS IAKWLAIDPR IIILDAPTIG VDIANKEGIF QIIRTLAQKG IAVIFVTDEV EEAYYNSHKV IVMKKGKIVG EILPIYTTEK SIAEVVYENH Q
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