| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_1280 |
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| Symbol | dnaJ |
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| ID | 8709663 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | - |
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| Start bp | 1529307 |
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| End bp | 1530368 |
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| Gene Length | 1062 bp |
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| Protein Length | 353 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 646483368 |
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| Product | DnaJ domain protein |
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| Protein accession | YP_003374469 |
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| Protein GI | 283783715 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGAAA ATGAATGGTT AGCTAAGGAT TTTTATAAGG TTCTCGGTGT CTCCAAAGAC
GCAGATGAGG CAACGATTAC CAAAGCGTAT CGCAAACTTG CTCGTAAATA TCACCCTGAT
TTAAACAAAA CAAAAGAAGC TGAAGAAAAA TTTAAGGATG TTTCTGAAGC TTACGACGTA
CTAAAAGATA GTCAAACTCG CCAACGTTAC GATGCTATCC GCCAATTTGG TGCTGGTGGT
GCTCGTTTCG CTGGAGGAGC AGGTGGTGCT GGCGGTTTCG ATGCGTCGAG CTTCTCGGAC
ATTTTCTCTA TGTTCAACGG CGGCTCTGGC ATGGGCAGCA TGGGTGGCAT GGGCGGAAAC
GGTTCGCGCA TTCGCTTTAC ATCCAACGGT GCTGGACCAA ATATGAGCGA CATTTTCTCT
ATGTTTGGTG GAGGTCAGCG CTCTCAAGAT TCAGCAGGAT TCCAGGGTAC GAGTGGCTTT
GGTGGTGAGA GGTATTCTCA ACCGCAGGAA GCTAATGTGC CTGAAGTTGG CGAAGATATA
ACAACCGATA TAAAGCTCAC ATTTAAGCAA GCTTTTAAAG GCGCTACAGT ATCGTTGCGT
GCGGCTGGTG AAACTTTTAA AACGCATATT CCAGCTGGTG TAAAAACCGG ACAGAAAATT
CGTTTGAAAG GAAAAGGCAA GCCAGGCAAG TTCGGTGGTG CTGCAGGTGA CTTGTACTTG
CATGTTCAAG TAGAAGCATC AGATAAATTT ACTTTGCGAG GCGACGATTT GATTTCTACA
TTGCCGCTAA CGTTAAGTGA AGCAGTGCAT GGTGCAAAAG TTAGTATAAA CGACCTAGAC
GGCAACCCTG TTACTTTCAA AGTTCCAGCT TGTGTTTCAA GCGGCGATGA AGTTCGTATA
GAAGGTGCTG GAGTGCCGGG GGAAAATGGC GATTTTGTTG GCGTTGTGCA GATTCGTTTG
CCAAAGCGTT CAAGTATGTC TCTTAGACGC GTTGCAAAAG AATTTGATAA AACTGCTGGC
GAAACTTATG CTGAAGAAAT TAAAAAATTA AGACAAAACT AA
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| Protein sequence | MAENEWLAKD FYKVLGVSKD ADEATITKAY RKLARKYHPD LNKTKEAEEK FKDVSEAYDV
LKDSQTRQRY DAIRQFGAGG ARFAGGAGGA GGFDASSFSD IFSMFNGGSG MGSMGGMGGN
GSRIRFTSNG AGPNMSDIFS MFGGGQRSQD SAGFQGTSGF GGERYSQPQE ANVPEVGEDI
TTDIKLTFKQ AFKGATVSLR AAGETFKTHI PAGVKTGQKI RLKGKGKPGK FGGAAGDLYL
HVQVEASDKF TLRGDDLIST LPLTLSEAVH GAKVSINDLD GNPVTFKVPA CVSSGDEVRI
EGAGVPGENG DFVGVVQIRL PKRSSMSLRR VAKEFDKTAG ETYAEEIKKL RQN
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