| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_1274 |
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| Symbol | |
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| ID | 8709329 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | - |
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| Start bp | 1522515 |
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| End bp | 1523822 |
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| Gene Length | 1308 bp |
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| Protein Length | 435 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 646483362 |
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| Product | PAP2 family protein |
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| Protein accession | YP_003374464 |
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| Protein GI | 283783710 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.594886 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGAAG AATTTGCAGG AATTCAATCC AATAGCATTG ACAATCAGCA TGATGATTCT
GCTGAGAAAA ATGATGCGCT GCCGGTAGGT GGAACTTCGC AAGATGTTAA TCGCAACAGT
GAAGGTGGTG ACTATTCGCA TCCTTTGGAT TCGATTAATA CTATTACGCC ATTTTCTCCA
ATCTCATCTG AAGATAATGA CGAAAAAATA TCGCCTTTAT TTCCAGAAAA TAATGAAGAA
AAATCTTCTA AACAGTCTGT AAAACAGTTT GTGAAACAAA CTAAGCGTCA ATCTGATTTG
TCTGGCTCGT CCGATTTGTC GTATTCGACT AATCAGTTAT CTTCTAAAGA TTCTCTATCA
GATGCAGATG ATATTGATCA GCTTGGTCAG CTTGTAAAGC GTCCTAGAAT ATCTACCATA
TTGTGGTGTG TTGCTATTGC AATTGTTTTC TTGGCTTCTG CTGCGTTCAT ATGGTTTATT
AGTGTGCAAA CAGTACTTGG TCAAAGCTAT GAAGAAATGG TAATTGATGG ATTTGGTTCT
CATGGTACGC CATCTTGGCT TGCATTTTGT TTGCGACCTA TAAGCGTTTC TATGGTTGTT
ATAGTTACTA GCATAATAAT TGCTCTTGTT TCACTCATAG TAGTTTGTAT TCGTAAACGT
TGGTGGCTTC TTGGTCAATG TGCTGGAATT ATTATTCTTT CGGCTGCTGC TGAACCATTG
AAAAAAATTC TTCCGCGCCC AATGCTTATA AGTATTGAAT ATTTGTCTGC AAATTCAGCA
CCTTCAGGTC ATACCTTACT TATTACTGCA TCATGTGCGT TGCTTATTTG CGCAGTTTCG
CGTGTTTGGC GCGCATGGGC AGCGGTAGCT GCAGCTTTTA TAAGCGTTCT TGTGGAACTT
TCGTTGGTTG CAGCGCATTG GCATAGAGTT TCTGACGTTC TTATGTCATT ACTTATCGTT
GGTGCTGTAA CGCTTATTAT ACTCGCATGC ACTCGCAGTA GTGGAATGGA TATGCCAGCT
TATCGACGTT CCTCAATTAG CGTTCAAATT GTAGGAAGCT CTATGATTAC GATTGGTGTG
TTGGCGTGTT TGTATGCACT TTATTTAATA TGGCAAATTC TTCCTGGTGT TGATATTTTT
GCTCAATGGG CTGCAAGCGT ATCTTATGTA GCAACTTATT GGCTGATTAT AGGTGTGTCT
TTGCTTGTTT TTGGCGTAAT TATGGTAATG CGTCACTCTA CAGCTTCGCC GTTGAGTAGG
CTTGGATTAG TAGGCGCTCC GCCGACGCCT CCATCTGCTT CTAAGTAA
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| Protein sequence | MSEEFAGIQS NSIDNQHDDS AEKNDALPVG GTSQDVNRNS EGGDYSHPLD SINTITPFSP
ISSEDNDEKI SPLFPENNEE KSSKQSVKQF VKQTKRQSDL SGSSDLSYST NQLSSKDSLS
DADDIDQLGQ LVKRPRISTI LWCVAIAIVF LASAAFIWFI SVQTVLGQSY EEMVIDGFGS
HGTPSWLAFC LRPISVSMVV IVTSIIIALV SLIVVCIRKR WWLLGQCAGI IILSAAAEPL
KKILPRPMLI SIEYLSANSA PSGHTLLITA SCALLICAVS RVWRAWAAVA AAFISVLVEL
SLVAAHWHRV SDVLMSLLIV GAVTLIILAC TRSSGMDMPA YRRSSISVQI VGSSMITIGV
LACLYALYLI WQILPGVDIF AQWAASVSYV ATYWLIIGVS LLVFGVIMVM RHSTASPLSR
LGLVGAPPTP PSASK
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