| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_1066 |
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| Symbol | |
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| ID | 8709976 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | - |
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| Start bp | 1217675 |
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| End bp | 1218463 |
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| Gene Length | 789 bp |
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| Protein Length | 262 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 646483158 |
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| Product | ABC transporter, ATP-binding protein |
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| Protein accession | YP_003374269 |
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| Protein GI | 283783515 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1126] ABC-type polar amino acid transport system, ATPase component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0891394 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTAGAAG CAAAATCTAA TCTTCCTGCG GTTGCTATTA ACGATGTGCA AAAATCTTTC
GGCCAATTGC ATGTACTTAA CGGTATTAAT ATGACAGTGA ACCCAAGTAG TGTAACAGTT
ATTTTGGGTC CGTCCGGTTC TGGAAAATCG ACGTTATTGC GTTTAATTAA TCAACTAGAA
ACTTTGACTG CAGGAAGTAT AAGTATTTAT GGCGAGCGCA TCGGTGTAAA GCAAGTAATG
CATAAAGGTG AGAAGTGCCT GCAGGCTCTT AACGACAAAG AAATTGCTCA ACAGCGTGCG
AAGCTTGGCA TGGTATTCCA GCGTTTTAAT TTATTCCCTC ATATGACGGC TTTAGAAAAC
GTTATGGAAG CTCCTATTCA TGTTATGCAT ATGAAAGCTC AAGAAGCGCG CGATTTAGCT
ATTGAAGAAC TAAAGCGAGT TGGCATGGAT GAGCGTATGA ACCATTATCC TGCAGAACTT
TCAGGCGGTC AGCAGCAGCG CGTTGCAATT GCTCGCGCTC TTGCTATGAA ACCGGAAATT
ATGCTATTTG ACGAGCCAAC ATCTGCGCTA GATCCAGAGC TTGTAGGTGA AGTGTTAACC
GTTATGCGAA ATCTTGCTAA AGATGGCATG ACTATGATTG TAGTAACTCA CGAAATTGGT
TTTGCGCGTG AGGTTGCAGA TCAGGTTGTG TTTATGGATG GCGGTGTCAT AGTTGAGCAG
GGTAGTGCAG ATATTATTAC TAGTCCGCAA ACTGATCGTT TTAAAGATTT CCTAAATCAC
GTATTGTAA
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| Protein sequence | MVEAKSNLPA VAINDVQKSF GQLHVLNGIN MTVNPSSVTV ILGPSGSGKS TLLRLINQLE
TLTAGSISIY GERIGVKQVM HKGEKCLQAL NDKEIAQQRA KLGMVFQRFN LFPHMTALEN
VMEAPIHVMH MKAQEARDLA IEELKRVGMD ERMNHYPAEL SGGQQQRVAI ARALAMKPEI
MLFDEPTSAL DPELVGEVLT VMRNLAKDGM TMIVVTHEIG FAREVADQVV FMDGGVIVEQ
GSADIITSPQ TDRFKDFLNH VL
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