| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_1036 |
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| Symbol | |
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| ID | 8710002 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | + |
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| Start bp | 1177159 |
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| End bp | 1178538 |
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| Gene Length | 1380 bp |
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| Protein Length | 459 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 646483129 |
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| Product | hypothetical protein |
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| Protein accession | YP_003374241 |
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| Protein GI | 283783487 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2382] Enterochelin esterase and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGCAAT TGGCAAAAGT GAGTCTTTTG CAAGGATGGC TACCAGTAAG CCTTTTTAGC
GTAAATGGTA TTTCTTTAGT CTTGTTGCTT TTTATGAAAA CAAAACGCGG CAAGAAAATG
TTCCACTTAC TAATACAACT TGCAATAGGT GTCATAACAT TTTTTGTCGG TGGAATAATT
GCTTGGCTTA TTTCTGACGT GTTTCTTGTA TTCGAAGTAA GTCTTGGATG GCTCGTTATT
TTTTCTATTG CATGCGGCTT CGGGCTTATA GGTTTTGCAG CAACAGCATT TGTTTTCTTA
CACAAATGGA GAAAACTAGT TGCAGTAATA GCTATTATCT TGACGTTAGC AAGCACAGCT
CTTCATGTAG ACATGATTTA TGGGGAATAC ACGACAATAG GTTCAATATT TGGAATGGGC
GGTTTTCCAA AACTAGAAGT TAATAAGCAA AAATCCGCAT CCTCTAGTAT TAAACAATGG
AGAGAGTTAG CAGCACAACA AAAACTGCCA AAACTGCCTA AAAAAGGTAT TGTTCGTTCA
GTTTATATCC CTAACACTGC TTCACATTTC AATGCCAGAA TAGCAAACGT ATACTTGCCA
CCTGCTGCAC TTGTTAAAAA ACCACCAAAA CTGCCAGTTA TGGTCATGTT TGCAGGACAA
CCTGGTAGCC CTAATCACTT TTTTGCAGCA AGCGATATTG CAAATACTTT AGACAATTAC
GCGAAAAATC ACTACGGTCT TGCACCTATT GTTGTAGCCC CTGACCAAAA TGGTGAATCT
TCGCATAATT CTCTGTGTGC GGATACACAT GTGTTCGGCA AAGCAGAAAC ATATTTAATT
AATGATGTTC CTAAATGGAT ACGCAAACAT TTGCCAGTAA GCAAAGATCC TAAAATGTGG
CTTATGGGCG GCTTCTCACA AGGAGGCACT TGCTCAACGC AACTAGTTCC ATCTCACCCT
GATATATTTG GAAACATTTT TTCTGCCGGA GGGGAACTAG AACCAACATA TAAGAATCGC
CAAGAAACAA TTAATCATTA TTTCAATGGA AACACATCAG AATATGAGCG ACATATACCT
AGCGTGATAA TGCGTAAAAA TGCTCCTTTG AAACAAAATT ATTACGCTAT TGCGGGCTCA
TGGGATACTA AATCTCAAGC GAATCAGGCA ACCATCGCAC TAAGCGCACA TCGCGCTGGA
ATGAATGTTA TAACCATGCT TTCTCAAGGC AATGGTCATG ATTGGCACAC AGTAAAAGCT
GGATTAAAAA TAGCAATTGA TCAATTCTGC AAAAAAACAG GTATTTCAAG CACTGCACCA
AAACTTAATA CCTACCAAAA TGTACAAATT CTTATCAACC AGCAAGTGAA TCGAGACTAA
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| Protein sequence | MLQLAKVSLL QGWLPVSLFS VNGISLVLLL FMKTKRGKKM FHLLIQLAIG VITFFVGGII
AWLISDVFLV FEVSLGWLVI FSIACGFGLI GFAATAFVFL HKWRKLVAVI AIILTLASTA
LHVDMIYGEY TTIGSIFGMG GFPKLEVNKQ KSASSSIKQW RELAAQQKLP KLPKKGIVRS
VYIPNTASHF NARIANVYLP PAALVKKPPK LPVMVMFAGQ PGSPNHFFAA SDIANTLDNY
AKNHYGLAPI VVAPDQNGES SHNSLCADTH VFGKAETYLI NDVPKWIRKH LPVSKDPKMW
LMGGFSQGGT CSTQLVPSHP DIFGNIFSAG GELEPTYKNR QETINHYFNG NTSEYERHIP
SVIMRKNAPL KQNYYAIAGS WDTKSQANQA TIALSAHRAG MNVITMLSQG NGHDWHTVKA
GLKIAIDQFC KKTGISSTAP KLNTYQNVQI LINQQVNRD
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