Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HMPREF0424_0903 |
Symbol | tal |
ID | 8709702 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Gardnerella vaginalis 409-05 |
Kingdom | Bacteria |
Replicon accession | NC_013721 |
Strand | + |
Start bp | 1030251 |
End bp | 1031354 |
Gene Length | 1104 bp |
Protein Length | 367 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 646483001 |
Product | transaldolase |
Protein accession | YP_003374117 |
Protein GI | 283783363 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0176] Transaldolase |
TIGRFAM ID | [TIGR00876] transaldolase, mycobacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGAAG CAACGCAGCG CACCAGCGAT TCCGGCGTTT CTATTTGGTT GGACGATTTG TCCCGTACCC GCATTGAGTC CGGCTCTTTG CAGGATTTGA TTGCTAATAA GAATGTTGTT GGCGTTACCA CCAACCCATC CATCTTCCAG AAGGCTTTGA GCCAGGTTGG CCCATACGAT GCACAGCTTA AGGAACTCGG CAAGGTCGAC GTTGAAACCG CTATCCGCGA GTTGACCACC ACCGACGTTC GTAACGCAAC CGATATCTTC CGCGAGATCG CTGAAAAGAC CGACTTCGTT GACGGCCGCG TCTCCATCGA AGTTGACCCA CGCTTGGCTC ACGATACTGC TAACACTGAG AAGCAGGCTG AAGAGCTTTG GGCAAAGGTT GATCGTCCAA ACGTTATGAT TAAGATTCCA GCAACTTTGG AAGGTCTTCC AGCTATCACC GCTACCCTTG CTAAGGGTAT TTCTGTGAAC GTAACCTTGA TCTTCTCCCT CGAGCGCTAC GAGCAGGTTA TCGACGCCTT CATCGAAGGT ATTGCTCAGG CAGATGCTAA CGGCCACGAC TTGAAGCACA TTGGTTCCGT AGCTTCCTTC TTCGTCTCCC GCGTTGATAG CGCTGTTGAC AAGCTCCTCG AAGCTAACGG CTCCGATGAA GCTAAGGCTC TTGAAGGCAA GGCTGCTGTT GCTAACGCTC GCTTGGCTTA CGAACTCTTC GAAAAGAAGT TCGCAGCTGA CCCACGTTGG GCTGCTCTTG AAGCTAAGGG CGCTAAGAAG CAGCGTCCAC TTTGGGCTTC TACCGGCACC AAGAACGCAG CTTACTCCGA CTGCAAGTAC GTTGACGAGT TGGTTGCTGA GCATGTTGTG AACACCATGC CAGAAAAGAC TTTGAACGCT CTTGCTGATC ACGGCAACGG CGCTGCTTCC GTTAAGGGCA CTTACGAAGA GAGCCACGCT GTTATGAACA AGCTTGCTGA GCTTGGCATC AACATTAAGG ACGTTACCGA CAAGCTTGAG GCCGACGGTG TTGCCGCCTT CATCAAGTCT TGGGATTCCG TGATTGCTGA CGTGCAGTCC GGCATCGATC GCGTAAACGC CTGA
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Protein sequence | MTEATQRTSD SGVSIWLDDL SRTRIESGSL QDLIANKNVV GVTTNPSIFQ KALSQVGPYD AQLKELGKVD VETAIRELTT TDVRNATDIF REIAEKTDFV DGRVSIEVDP RLAHDTANTE KQAEELWAKV DRPNVMIKIP ATLEGLPAIT ATLAKGISVN VTLIFSLERY EQVIDAFIEG IAQADANGHD LKHIGSVASF FVSRVDSAVD KLLEANGSDE AKALEGKAAV ANARLAYELF EKKFAADPRW AALEAKGAKK QRPLWASTGT KNAAYSDCKY VDELVAEHVV NTMPEKTLNA LADHGNGAAS VKGTYEESHA VMNKLAELGI NIKDVTDKLE ADGVAAFIKS WDSVIADVQS GIDRVNA
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