Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HMPREF0424_0604 |
Symbol | |
ID | 8709971 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Gardnerella vaginalis 409-05 |
Kingdom | Bacteria |
Replicon accession | NC_013721 |
Strand | + |
Start bp | 661697 |
End bp | 662269 |
Gene Length | 573 bp |
Protein Length | 190 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 646482713 |
Product | TM2 domain protein |
Protein accession | YP_003373840 |
Protein GI | 283783086 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATTATTG TGAGTGATTT AGATAATCAA ACTGGAGATT ACTCCGGCTC TGACGGACAG ACTCAGTACG GACAACCACA GTACAATGAT CAGTCCCAGC AGTATAACCA GGCTCAGCCA CAATATAACA ACCAATCCCA GTATGGTGCT CAGCATCAGT ACAATGCTCA GCCACAGTAT GGTCAGACTC AGTATGATCA GAATTCATAT GCTCAGCCGC AATACAATGC TCAGCCGCAA TATGGTCAGT ACTCTCAGTC TACTCCTCAG TACAATCAAG CATCTTCATA CTCTAACTAT GGGTCTAATT ATTCATCAAA CACATACAGA AGCTCTCGTA ACAAGATTGC TGCAGGTCTG TTAGCCATTT TCTTGGGTGC TTTGGGTGTG CACAATTTCT ATCTTGGTTT TAAAGGCAAG GCTGTTGCTC AGCTGCTTAT TTCTATTCTT TCTTTCGGCT TGCTGGCTTT TGTTTCTGGA ATTTGGGCAT TTATTGAAGG AATTTGCATT CTTTGCTCTC AGCCTGGTTC TAAGTGGCAT AAGGATGCCG ATGGAGCTGA ACTTCAAGAT TAA
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Protein sequence | MIIVSDLDNQ TGDYSGSDGQ TQYGQPQYND QSQQYNQAQP QYNNQSQYGA QHQYNAQPQY GQTQYDQNSY AQPQYNAQPQ YGQYSQSTPQ YNQASSYSNY GSNYSSNTYR SSRNKIAAGL LAIFLGALGV HNFYLGFKGK AVAQLLISIL SFGLLAFVSG IWAFIEGICI LCSQPGSKWH KDADGAELQD
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