| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0551 |
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| Symbol | |
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| ID | 8709231 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | + |
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| Start bp | 595255 |
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| End bp | 596064 |
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| Gene Length | 810 bp |
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| Protein Length | 269 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 646482661 |
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| Product | phosphorylase, Pnp/Udp family |
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| Protein accession | YP_003373788 |
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| Protein GI | 283783034 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG2820] Uridine phosphorylase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.000000889574 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCAGAAT ATGATTTGCC GATTTTAGAG TATGATTCCG ATAAAAGTGC GGTTATTATA
CCAAATCACG ATAATATTTC TGTTCAGCTT CCATCTAAAG CGGTTTTTGC TTTTTTAGGC
GATGAAATCG ATCAGTATGC TTTAAGTAGG AAAGCTACGA TTGTAGCAAA TTTTGAATCT
GCAACTAAAG TATATCCAAT ATATGTTTTG GAAGAAAAAG TAGAGAAAAA AGTAAAGGAA
GACGCAAACA GCGAAGTAGA AGAAGAAACT CAAAAAATCT GCTTAGTACA AGCTCCAGTT
GGCGCTCCTG CTGCTGTTCA GATCTTAGAT TGGTTGATTT CTTACGGCGT TAGGGAAGTT
GTTAGTGCTG GTTCTTGTGG GTCGCTAGTT GATTATGCGG AAAACGTTTT TCTGGTTCCG
TATAAAGCTT TAAGGGATGA GGGGACTTCT TATCATTATT TGCCTCCAAG TCGTTATGTT
GATGTTTCAG AGCGTTCGAG GCGTGCTATT TTGCAAACTT TGCAGGCGCA TAATTTGCCT
TATCATGAAG TTAAAACGTG GACTACGGAT GGGTTCTTCC GTGAGACTAA GACGAAAGTT
GCTAATCGTA AGCAGGAGGG ATGCGCGGTT GTTGAAATGG AGTGTTCTGC TTTAGCGGCT
TGTGCGCAAA TGCGTGAGAT TGTTTGGGGT GAGATTCTTT ACACTGCAGA TACTTTGCAC
GATGTTGAAA ATTATGATGA GCGCAATTGG GGTGGGGATT CTAAAGCGTA TGCGCTTGAG
CTTTGTGTTG AAGCGGTGTT GCGTATTTAA
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| Protein sequence | MAEYDLPILE YDSDKSAVII PNHDNISVQL PSKAVFAFLG DEIDQYALSR KATIVANFES
ATKVYPIYVL EEKVEKKVKE DANSEVEEET QKICLVQAPV GAPAAVQILD WLISYGVREV
VSAGSCGSLV DYAENVFLVP YKALRDEGTS YHYLPPSRYV DVSERSRRAI LQTLQAHNLP
YHEVKTWTTD GFFRETKTKV ANRKQEGCAV VEMECSALAA CAQMREIVWG EILYTADTLH
DVENYDERNW GGDSKAYALE LCVEAVLRI
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