Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HMPREF0424_0193 |
Symbol | |
ID | 8709864 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Gardnerella vaginalis 409-05 |
Kingdom | Bacteria |
Replicon accession | NC_013721 |
Strand | - |
Start bp | 216854 |
End bp | 217120 |
Gene Length | 267 bp |
Protein Length | 88 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 646482312 |
Product | toxin-antitoxin system, toxin component, RelE family |
Protein accession | YP_003373457 |
Protein GI | 283782703 |
COG category | [D] Cell cycle control, cell division, chromosome partitioning [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG2026] Cytotoxic translational repressor of toxin-antitoxin stability system |
TIGRFAM ID | [TIGR02385] addiction module toxin, RelE/StbE family |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGATTTGGA AGATTAATTT ATCTAAAAGA GCTGAAAAAC AGCTAGGGAA AATTGACAAA ACGATTGCTA AGCAAATCGT TAAGGAGCTT CGCGAAATTA GCAATCTCGA CAATCCTCGA ATCAGAGGCA AGGCACTAAC TGGCAACTAT TCGGGATTTT GGAGATATAG AGTAAGGGAT TACAGAATAA TTTGTGCAAT TGAAAATAAT GTACTGACCG TTTTTGTTGT GGATATTGAC CATCGCAGCA GGATTTATAA TAAGTGA
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Protein sequence | MIWKINLSKR AEKQLGKIDK TIAKQIVKEL REISNLDNPR IRGKALTGNY SGFWRYRVRD YRIICAIENN VLTVFVVDID HRSRIYNK
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