| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0173 |
|---|
| Symbol | |
|---|
| ID | 8709332 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Gardnerella vaginalis 409-05 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013721 |
|---|
| Strand | + |
|---|
| Start bp | 193519 |
|---|
| End bp | 193647 |
|---|
| Gene Length | 129 bp |
|---|
| Protein Length | 42 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 646482292 |
|---|
| Product | putative addiction module killer protein |
|---|
| Protein accession | YP_003373437 |
|---|
| Protein GI | 283782683 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3657] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | [TIGR02683] probable addiction module killer protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTATTTTG CACAAAAAGG CTTAAAACTA ATGCTATTAC TTGCTGGTGG AGATAAAAGT
AGTCAAAGTA AAGATATTAA GCAAGCGAAG ATACTTCTCG CACAATTAAT TGAGGAGAAA
AAATGGTAA
|
|---|
| Protein sequence | MYFAQKGLKL MLLLAGGDKS SQSKDIKQAK ILLAQLIEEK KW
|
|---|
| |