| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gura_3406 |
|---|
| Symbol | |
|---|
| ID | 5165014 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter uraniireducens Rf4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009483 |
|---|
| Strand | - |
|---|
| Start bp | 4004616 |
|---|
| End bp | 4005338 |
|---|
| Gene Length | 723 bp |
|---|
| Protein Length | 240 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 640550892 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001232135 |
|---|
| Protein GI | 148265429 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.225311 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTGCCA TAGAAGTGGC TGGACTGACA AAAATATACG GCAAAGGGGA GACGATGGTT
ACGGCCATCT CTGATGCCAC CTTCCAGGTC AAGCCGGGGG AGTTGGTCGC CATTCTCGGT
CCGTCGGGGT CCGGGAAAAC CACGCTTCTC ACCTCCATCG GCCTGATCAA CGAACCGACC
CGCGGCAAGG TGGTCATTGA CGGCACAGTC GTCGCCGATG AAGGATGGCG GCCGGGGCTG
GACCTGAAGC GGATTCGCCG GGAAAAGCTC GGCTTCATCT TCCAGGCCCA TAACCTTATC
CCGTTTTTGA CCGCCATGGA AAACGTGATG GTGGCGCTGG AGATAAACCA CCTGCCGCGA
TCAGAGGCCA GGGAAAGGGC CGAGGAACTC CTCACCACGT TGAACCTGGG GCATCGGCTG
AACAACTACC CCTCTGCCCT TTCAGGTGGG GAAGCGCAGA GGGTGGCGAT CGCGCGGGCT
TTGGCCAACA GGCCGAAGGT GATCCTTGCC GACGAACCGA CCGCGGCGCT GGACACCGGG
AACGGCAAAA ACGTCATGAC GCTCCTGAAG AAACTGGCGG TGGAAAACCA TTCAGCCATC
CTGGTCGTCA CCCATGACCA CCGGATGGTG GAAGGGTTCG ACCGGATATT CCATGTGAGC
GACGGCCGCA TTGCCGGCGA AAAGAATAAC CTGGAGGTGA CAGGAAACCA TGAACTGGGA
TGA
|
|---|
| Protein sequence | MFAIEVAGLT KIYGKGETMV TAISDATFQV KPGELVAILG PSGSGKTTLL TSIGLINEPT
RGKVVIDGTV VADEGWRPGL DLKRIRREKL GFIFQAHNLI PFLTAMENVM VALEINHLPR
SEARERAEEL LTTLNLGHRL NNYPSALSGG EAQRVAIARA LANRPKVILA DEPTAALDTG
NGKNVMTLLK KLAVENHSAI LVVTHDHRMV EGFDRIFHVS DGRIAGEKNN LEVTGNHELG
|
|---|
| |