| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gura_2890 |
|---|
| Symbol | |
|---|
| ID | 5166081 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter uraniireducens Rf4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009483 |
|---|
| Strand | + |
|---|
| Start bp | 3352149 |
|---|
| End bp | 3353693 |
|---|
| Gene Length | 1545 bp |
|---|
| Protein Length | 514 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 640550385 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001231635 |
|---|
| Protein GI | 148264929 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR02543] Listeria/Bacterioides repeat |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.921469 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAAGCCTG AAAAGGGTTG CCGATTGCGG CAGCCCTTTT TTTATCGTCA GCCCCGGACG
CCCACTCCAC CACGTTTCAC CGTCTCTGAT GGTGCGGTCA CCGACAACCT GACCGGACTG
ATCTGGCTGC AGAATGCCAA CTGTTTTGGA GGCCAGACAT GGGCGGCTGC GCTTGCCAGC
GGCAATAATC TGGCAAGCGG CGCCTGCGGC CTGACCGACG GCTCCACTGC CGGTCAGTGG
CGACTGCCGA CACGGCTGGA GATGGAGAGC CTGGTGGATA GGTCAACGTA CAATCCAGCG
TTGCCAGACA ACCATCCATT CATCAATGTC CAGGCTTTCT ACTACTGGTC GTCCAGTACC
TACGGCTATT TTTATACAGA CTTCGCCTGG GGCGTCAATA TGTACGATGG CGGCGTGAGC
AACACCCTCT ATAAGACGAA CAGCAACTAC TTTATCTGGC CCGTTCGTGG CGGACAGTTC
GGTAATTCGG TCATTTCGGT TCTTCCCGCA TCGATAGCTT TCGGTACCAG TAATCAGGTC
GTCACTATCA GCAACACTGC CCCTGGCGGC TCCAGCAAGC TGCAAATCAA TGCAATCGGA
CTGCGAGGGA CCAACCCCAG CCAGTTCAGC ATCAACCCCG GAGACGGTAC CGGTGGCACC
TGCGGCAGCA CCACGCCGAT CCTCACCCCC GGTGCCTCCT GCACCGTCAC GGTCAGCTTC
ACCCCGTCAA GCTTAGGGAC AAAGAGCGCC ACCCTGCGCG TCTCCGGGAG TGACGTGAAT
GCCCCCAACA CCGATACCCC CCTGAGCGGA ACGGGATTCA CCGTCACAGG TAGCGTCAGC
GGCGGCAACG GCAGCATCTC CTCTGCTAAC CCCACCTATG TGGCGAACGG CGCCACTGCC
TCCTTCACCC TCGCACCTGC CGCCACATAC CAGCCTTCTA CCACCGTAAG CGGCACCTGT
CCGGTCGGCT CTTTCAACGG CAATAGCTAC ACCACCGGCG CGATTACGTC GGACTGCACA
GTCGGTTTTT CTTTCGTGAA GAACACCTAT CCATTGACTA TAACCTTCAC TGGCACAGGC
GGCGGTACAG TGGCTGTGCA GCCAAACCCG CCGGCCACCG ACTGTACCGG CACGTGCAGT
CAGTCTATAC GCATCGGCAC TGCGGTGACC CTTGCTCCCG CCGCCAACAA CGGTTCATCG
TTCACCGGCT GGTCCGGAGC ATGCACAGGT ACCGGCGTGT GCCAAGTAAC CATGGACACG
GCAAAGAGCG CTACAGCGAC ATTCACATAC GCCCCGGCAA AAGTCGCCGA CAATTTTTAC
ACTACGGTTG GCGCGGCATT ATTATCCGAT GTTCTTGACG GCGGTACATT ACAATTGCAA
AGTATGGACT TAACAGAGAC CATAGTGTTC AACCGTTCTG TTTCTTTCTC TCTTCAGGGC
GGGTATGACC CTTTGTTCAC ATCTATCAAC AATGCAACCG TTATACATGG CTCCATTGCA
ATAAGTGCCG GAACGGTGAA CATCGACAAC ATCGTGATCA TGTAG
|
|---|
| Protein sequence | MKPEKGCRLR QPFFYRQPRT PTPPRFTVSD GAVTDNLTGL IWLQNANCFG GQTWAAALAS
GNNLASGACG LTDGSTAGQW RLPTRLEMES LVDRSTYNPA LPDNHPFINV QAFYYWSSST
YGYFYTDFAW GVNMYDGGVS NTLYKTNSNY FIWPVRGGQF GNSVISVLPA SIAFGTSNQV
VTISNTAPGG SSKLQINAIG LRGTNPSQFS INPGDGTGGT CGSTTPILTP GASCTVTVSF
TPSSLGTKSA TLRVSGSDVN APNTDTPLSG TGFTVTGSVS GGNGSISSAN PTYVANGATA
SFTLAPAATY QPSTTVSGTC PVGSFNGNSY TTGAITSDCT VGFSFVKNTY PLTITFTGTG
GGTVAVQPNP PATDCTGTCS QSIRIGTAVT LAPAANNGSS FTGWSGACTG TGVCQVTMDT
AKSATATFTY APAKVADNFY TTVGAALLSD VLDGGTLQLQ SMDLTETIVF NRSVSFSLQG
GYDPLFTSIN NATVIHGSIA ISAGTVNIDN IVIM
|
|---|
| |