Gene Gura_1237 details

Gene Information

• Locus tag: Gura_1237
• ID: 5165729
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter uraniireducens Rf4
• Kingdom: Bacteria
• Replicon accession: NC_009483
• Strand: -
• Start bp: 1462966
• End bp: 1464852
• Gene Length: 1887 bp
• Protein Length: 628 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 640548741
• Product: YD repeat-containing protein
• Protein accession: YP_001230014
• Protein GI: 148263308
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG3209] Rhs family protein
• TIGRFAM ID: [TIGR01643] YD repeat (two copies)

Plasmid Coverage information

• Num covering plasmid clones: 35
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGAACCGGC CAACGCACAA ACATTACCCG GCAGATTCGG GTGAAACAGA CGTAGTCTTT 
ACTTACGACG AAACGACCTC AATCAATCCG TTTGGCAGGC TTACCTCCAT GACAGACGGT 
TCCGGGAAGA CCACCTACAA TTATGACCTC TCCGGCAGGG TGACAAGAAC CGTCAAAACG 
GTAGACAACG TCGACTATAC CATTGTGAAA TCCTATGACG GCATGGGAAG GTTGAACAAC 
ATCACTTACC CGGATGGCGA ATCCGTTGAT TACCATTACG ACGCGGCTGG CAACCTGTTC 
GACATCAGCG GCTATGCGGA ATACGACGAG TACAACGCCC TCGGCCAGCC AGGCAAACTC 
TACTATGGCA ACGGCATCGT CACCAGTTAC TGGTACTATC CGCAAAATTA CCGCCTTTTT 
GCCATGAAGG CCGATCAGCT GCAGAATAGT CTGCTTTACC GCACCTACAA CTATGACAGC 
AAGGGGAATA TGATTGACCT GAATGACCTT GTCAATCCCT CCATCCCGCA TAACCTTACT 
TATGGCTCGG TCGGCTATAC CCTTGATCCG ACCCGTGCCC ATGCCGTTCA GACCGCCTCG 
ACCGCACCCG GTAGGGTCTA CCAGTACGAC GACAACGGCA ATATGACATC CGACGGCCAG 
AGGACGGTAA CGTATACCCC GGACAACTTG CCGAAAACTG CTACCATGAA CGGTGTCACA 
ACGACGTTCA TTTATGACGG CAACGGAAAA AGGGTGAAAA AGTTAAACTC GAATACAAGG 
ATGTACATCG GTAAATTGTA CGAATGCATC AATGGTAACT GCGGCAATTA CATCTTTGCC 
GGAAATACCA GAATTGCGAG GAACTTCCAG GGTTCGACCA TATATTACCA CCCTGACCAC 
CTTGGAAGTA CGGCGATTAC GACCGATGAC TACGGCAACA AGGTGGAGGA CATCTACTAC 
TACCCTTACG GCGAAACAAG GCTGGACAGC AAGCCAATAG GTGGCATGAC TCATAAGTAC 
ACCGCCCAGG AGCTGGATTA TGAAACAGGA CTCTATAACT ACGGTGCAAG ACTTTATGAC 
CCCGATATTG GGCGGTTTAT TTCTCCCGAT AGTATCGTGC CTAGTCCGGG GAACCCGCAG 
AGTCTGAACA GGTATGCTTA TGCGCTGAAT AATCCGGTCA AATACAGAGA CCCTAGCGGC 
CATTCGCCCA GGTCTTGCGC ATTGGGGTTC TGTAGCACTG TTGTTAATAC AGCGGCAGTT 
TATGCAGCTC CGACCGGCGT TGGTGGTGCC ATTGTTAAAG GTACTGGAAT TGGCTTGTCT 
TTATTATCAA TGGGGAATGC GTATTATGAG CACAAAACTG GAACTATGTC GGACTTTGAT 
TACAAAGCAA CTATGGGGCT GGAATCACTC AATCTTCTTA GTGTTGGAAG CGCTGCAGCT 
GCGGCAAAGA TAGGAAGAAA CATTGAAACA GTTGTTGAAA CTGCAGAAGT TGCGGACAGG 
TCAATCGCTA CAATGACTCG CGCCGCTGGA GTTCCTTTAT TTACAAAAGA TGTTTTTGAG 
ACTTATGGTG AACATTCTTC ATCGACTGCT AAAGGTAATG CATTCGACCA ATCCCTTTTG 
GGTTCTGGTC AAATTGATGG TAGTTTGTCT TATCTGTTAT CTCAATCGCC TATGCCCGAT 
TTACCTTCAA TTCCTACTTA TACTTTACCG ACTTATGATT TCAACAGTTG GTATCAAAAC 
TACACACCTG GCAATAATTC GACTTCTGGT AATACTGGCT CTACATCCGA TAATTCTGGT 
TCAACGACTG GTAATTCAGG TTCTTCGGGC GGTGGGTCTG ATGATGATGG TGGAGATGAT 
GGTGATGCTG GAGGTGATTG GTGGTGA 

 

Protein sequence

MNRPTHKHYP ADSGETDVVF TYDETTSINP FGRLTSMTDG SGKTTYNYDL SGRVTRTVKT 
VDNVDYTIVK SYDGMGRLNN ITYPDGESVD YHYDAAGNLF DISGYAEYDE YNALGQPGKL 
YYGNGIVTSY WYYPQNYRLF AMKADQLQNS LLYRTYNYDS KGNMIDLNDL VNPSIPHNLT 
YGSVGYTLDP TRAHAVQTAS TAPGRVYQYD DNGNMTSDGQ RTVTYTPDNL PKTATMNGVT 
TTFIYDGNGK RVKKLNSNTR MYIGKLYECI NGNCGNYIFA GNTRIARNFQ GSTIYYHPDH 
LGSTAITTDD YGNKVEDIYY YPYGETRLDS KPIGGMTHKY TAQELDYETG LYNYGARLYD 
PDIGRFISPD SIVPSPGNPQ SLNRYAYALN NPVKYRDPSG HSPRSCALGF CSTVVNTAAV 
YAAPTGVGGA IVKGTGIGLS LLSMGNAYYE HKTGTMSDFD YKATMGLESL NLLSVGSAAA 
AAKIGRNIET VVETAEVADR SIATMTRAAG VPLFTKDVFE TYGEHSSSTA KGNAFDQSLL 
GSGQIDGSLS YLLSQSPMPD LPSIPTYTLP TYDFNSWYQN YTPGNNSTSG NTGSTSDNSG 
STTGNSGSSG GGSDDDGGDD GDAGGDWW