| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gobs_3201 |
|---|
| Symbol | |
|---|
| ID | 8754881 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geodermatophilus obscurus DSM 43160 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013757 |
|---|
| Strand | - |
|---|
| Start bp | 3356144 |
|---|
| End bp | 3358882 |
|---|
| Gene Length | 2739 bp |
|---|
| Protein Length | 912 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | |
|---|
| Product | DNA polymerase I |
|---|
| Protein accession | YP_003410177 |
|---|
| Protein GI | 284991623 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGCTC CGGTTGCCAC CTCAGCGCCC ACCGCCCCCA CCGACCCGGG GGGCCGCCCG
CGGCTGCTGC TGCTCGACGG GCACTCGCTG GCCTACCGCG CCTTCTTCGC CCTGCCGGTC
GAGAACTTCT CGACGACGAC CGGGCAGCCG ACCAACGCGG TCTACGGCTT CACCTCGATG
CTGATCAACG TGCTCCGCGA CGAGCAGCCG ACGCACGTGG CGGTCGCCTT CGACGTGGGC
CGCAAGACCT TCCGCAACGA GATCTACGCG GAGTACAAGG CCAACCGCAG CGAGAGCCCG
ACCGACTTCC GCGGTCAGGT CAGCCTCATC CAGGAGGTGC TGGCCGCACT GCACGTCCCG
GTCATCACCG CCGAGGGCTA CGAGGCCGAC GACGTCATCG CCACCCTCAC CGTGGCGGCC
GTCGAGCAGG GCATGGACGT GCTCATCTGC ACCGGCGACC GCGACGCCCT GCAGCTGGTC
AACGAGCACG TCACCGTGCT CTACCCGCGC AAGGGCGTCT CCGACCTGAC CCGGTTCACG
CCGGAGGAGG TCGAGGCCAA GTACGGCCTG TCGCCGGCGC AGTACCCCGA CTTCGCGGCA
CTGCGGGGCG ACCCCAGCGA CAACCTGCCG AGCATCCCGA GCGTCGGGGA GAAGACGGCG
GCCAAGTGGG TCCGGGAGTA CGGCTCGCTC GACGCCCTGG TCGACCAGGT CGACACCGTG
AAGGGCAAGG TCGGCGAGAA GCTGCGCGAG CACCTGTCCT CGGTGCTGCA GAACCGGCGG
CTGACCGAGC TCGACCGTGC CGTGCCGCTG GAGCTCGGCC CGGCGGACCT CGCCGTTCGC
GCCTGGGACC GCAACGAGGT GCACACCCTC TTCGACAACC TGCAGTTCCG GGTGCTGCGC
GACCGGCTCT TCGCCACGCT CACCAGCGCC GAGCCGGAGG CCGAGGGCGG CTTCGACGTC
GCCGACGACG AGGTGCCCGC CGGCGGGCTG GGCGCCTGGC TGGACCAGCA CGCGCGCACC
AGCCGCACCG GCATCATCTT CCGGGGCACG TGGGGCCGGG GCACCGGTGA GCTGACCGGC
ATCGCGCTCG CTGGCGGCGA CGACCACGCC ACCTTCGTCG ACCTGGGCCC CGGCCTCGAC
GCCGTCGACG AGCAGGCGCT GGCCGACTGG CTGGCCGACC CGGACGCACA AAAGGTCGTG
CACGAGGTCA AGGGCCCGCT GCTGGCCGTC TGGGCACGCG GCTGGGACCT CGCCGGCGTC
GTCAGCGACA CGGCGCTGGC TGCCTACCTG GCGCTGCCCG GGCAGCGCTC CTTCGACCTG
GCCGACCTCG CCGTCCGGTA CCTGCGCCGC GAGCTGAAGG ACTCCGCCGC CGAGGAGACC
CAGCTGACCC TCGACGGGAT GGGGCCGTCG GAGGAGGACC TCGCCCGCGA GGCCGCGCAC
GCCGACGTCC TCAAGGCCGT CGCGGTCAAC GACCTCTCCG ACGCGCTGGA TTCCCTGCTC
GGCCAGCGCG GCGGCGACGC CCTGCTCGGC GGGATCGAGC TGCCGCTCAC CTTCGTGCTC
GCCCGCATGG AGCAGCGCGG CATCGCCGCC GACCTGGACT TCCTGCACGA GCTGCAGCGC
GAGTTCGCCG ACGGCGTGGC CGCCGCGGCC GCCGAGGCCT ACGCGGTCAT CGGCCGCGAG
GTGAACCTCG GCTCGCCCAA GCAGCTGCAG GCGGTGCTCT TCGACGAGCT GGGCCTGCCC
AAGACCAAGA AGATCAAGTC CGGCTACACG ACCGACGCCG AGGCACTGAC CAACCTGCTG
GCGCAGACCG GCCACCCGTT CCTCGAGCAC CTGCTCCGGC ACCGCGACGT CACCCGGCTG
CGCACCGTCA TCGACGGCCT GATCCCCATG GTCGACGACG GCGGGCGGAT CCACACGACG
TTCCAGCAGA CGATCGCCGC CACCGGCCGG CTGTCCTCGA TCGACCCGAA CCTGCAGAAC
ATCCCGATCC GCACCGCGGA GGGCCGGCGG ATCCGGCAGG CGTTCGTCGT CGGCTCCGGC
CACGAGTCGC TGATGACAGC GGACTACAGC CAGATCGAGA TGCGGATCAT GGCGCACCTC
TCCGGCGACG CGGGGCTCAT CGAGGCCTTC ACGTCGGGGG AGGACCTGCA CTCCTTCGTC
GCCTCCCGGG CGTACGACAT CCCGATCGAG GACGTCGACC CGGAGATGCG CCGCCGGATC
AAGGCGATGA GCTACGGCCT GGCCTACGGG CTGTCGGCCT ACGGACTGGC CGGGCAGCTG
CGCATCTCCG TCGAGGAGGC GCGCGAGCAG ATGCACGCCT ACTTCGAGCG CTTCGGCGGG
ATCCGGGAGT ACCTCGACGG CGTGGTCGAC GACGCCCGGC AGACCGGCTA CACCGAGACG
ACGCTGGGCC GCCGCCGCTA CCTGCCCGAC CTCACCAGCG ACAACGGGCA GCGGCGCCAG
ATGGCCGAGC GGATGGCGCT CAACGCCCCC ATCCAGGGGT CGGCGGCCGA CGTCATCAAG
GTGGCCATGC TGCGGGTGGA GCAGGCCATC GCCGACGAGG GGCTGCGCTC GCGGATGCTG
CTGCAGGTGC ACGACGAGCT CGTGCTCGAG GTGGCGCCCG GGGAGCGGGA GGCGCTGGAG
ACCCTGGTGC GCCGCGAGAT GGCCGGTGCC GCGCAGCTCT CGGTGCCGTT GGAGGTCTCG
GTCGGCTTCG GCCGGACCTG GGACGAGGCC GCCCACTGA
|
|---|
| Protein sequence | MSAPVATSAP TAPTDPGGRP RLLLLDGHSL AYRAFFALPV ENFSTTTGQP TNAVYGFTSM
LINVLRDEQP THVAVAFDVG RKTFRNEIYA EYKANRSESP TDFRGQVSLI QEVLAALHVP
VITAEGYEAD DVIATLTVAA VEQGMDVLIC TGDRDALQLV NEHVTVLYPR KGVSDLTRFT
PEEVEAKYGL SPAQYPDFAA LRGDPSDNLP SIPSVGEKTA AKWVREYGSL DALVDQVDTV
KGKVGEKLRE HLSSVLQNRR LTELDRAVPL ELGPADLAVR AWDRNEVHTL FDNLQFRVLR
DRLFATLTSA EPEAEGGFDV ADDEVPAGGL GAWLDQHART SRTGIIFRGT WGRGTGELTG
IALAGGDDHA TFVDLGPGLD AVDEQALADW LADPDAQKVV HEVKGPLLAV WARGWDLAGV
VSDTALAAYL ALPGQRSFDL ADLAVRYLRR ELKDSAAEET QLTLDGMGPS EEDLAREAAH
ADVLKAVAVN DLSDALDSLL GQRGGDALLG GIELPLTFVL ARMEQRGIAA DLDFLHELQR
EFADGVAAAA AEAYAVIGRE VNLGSPKQLQ AVLFDELGLP KTKKIKSGYT TDAEALTNLL
AQTGHPFLEH LLRHRDVTRL RTVIDGLIPM VDDGGRIHTT FQQTIAATGR LSSIDPNLQN
IPIRTAEGRR IRQAFVVGSG HESLMTADYS QIEMRIMAHL SGDAGLIEAF TSGEDLHSFV
ASRAYDIPIE DVDPEMRRRI KAMSYGLAYG LSAYGLAGQL RISVEEAREQ MHAYFERFGG
IREYLDGVVD DARQTGYTET TLGRRRYLPD LTSDNGQRRQ MAERMALNAP IQGSAADVIK
VAMLRVEQAI ADEGLRSRML LQVHDELVLE VAPGEREALE TLVRREMAGA AQLSVPLEVS
VGFGRTWDEA AH
|
|---|
| |