| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_3277 |
|---|
| Symbol | |
|---|
| ID | 3741261 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter metallireducens GS-15 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007517 |
|---|
| Strand | + |
|---|
| Start bp | 3686289 |
|---|
| End bp | 3687638 |
|---|
| Gene Length | 1350 bp |
|---|
| Protein Length | 449 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637780566 |
|---|
| Product | DNA repair protein RadA |
|---|
| Protein accession | YP_386215 |
|---|
| Protein GI | 78224468 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1066] Predicted ATP-dependent serine protease |
|---|
| TIGRFAM ID | [TIGR00416] DNA repair protein RadA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.142573 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 48 |
|---|
| Fosmid unclonability p-value | 0.6246 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGAAAACCA TGACATTGTA TGTCTGCCAG AACTGCGGAT ACCAGTCGGC CAAGTGGCTC
GGTAAGTGCC CCGACTGCTC CGCCTGGAAC AGCCTCGTGG AAGAGGTGCG GGGCAAGGGG
AAAGGCCCCT CCGCCCCCCT CTCCGGCGTG GCGCCGGTCC CCATCTGCGA CGTGGCGGGG
GAGGCGGAAG AACGGCTCCC CTGCGGCATA TCCGAGTTCG ACCGGGTCCT GGGCGGAGGG
TTAGTGGCCG GCTCCGTCAT CCTTATCGGC GGCGATCCCG GCATCGGAAA ATCAACCCTT
CTCTTGCAAG TGATGGACCA CTTGGCGCGC ACCGTCGGAC CGGTCCTCTA CGTTTCCGGC
GAAGAGTCGG CCCGGCAGGC GAGGCTGAGG GGAGAGCGGC TCGGTATCCG GGCAAAGGAG
CTTCTCATCC TGGCCGAAAC TGCCCTCGAA ACAGTGCTGG CCCAGATCGG CGCCGTGGCC
CCCCGGGCCG TGGTCATCGA CTCCATCCAG ACCATGTACG CCCCGGGGCT CGAATCGGCC
CCCGGAAGCG TGAGCCAGGT GCGGGAGTGC GCGGGGCGCC TCATGGTGGC GGCGAAACGG
AGCGCCATCC CCACCTTCAT TGTAGGGCAC GTCACCAAGG ACGGCTCCAT CGCCGGCCCC
CGGGTCCTGG AGCACATGGT CGACACGGTC CTCTACTTCG AGGGGGACCG GGGGCACGCC
TTCCGGATCC TGCGGGCGGT CAAAAACCGC TTCGGCTCCA CCAACGAGAT CGGCGTTTTC
GAGATGAAGG AGGGGGGACT CTGCGAGGTC CGCAACCCCT CGGAAATATT CCTTTCGGAG
CGCCCCCTGG GGGTGTCCGG CTCCGCCGTG GTCACCACCA TCGAGGGAAG CCGTCCGCTC
CTGGTGGAGC TCCAGGCCCT GGTCACCCCT TCCTCCCTGG GGGTTCCCCG CCGCACCACC
CTGGGGGTCG ACGCCAACCG TCTTGCCCTC CTGGTGGCCG TCCTCGACAA GAAGGTGGGA
CTCCACATGG CGGGGCAGGA CATCTTCCTG AATGCCGCCG GCGGGGCGAG GGTAAGCGAA
CCGGCCGCCG ACCTCGGTAT GGTGGCCGCC CTCGCCTCCA GCCATCTGGA CAAGGTCATC
GATCCCCAGA CGGTGGTTGT GGGCGAGGTG GGACTGGCCG GAGAGGTGCG GGCCATAACC
CAGCCGGAAA CCCGGGTACG GGAGGCGGCC AAGCTCGGCT TTACCCGGGC CGTCATCCCC
GCCGGCAGCC TCAAGCAGGT GACCGCCGTG GAGGGGATGG AAGTAATCGG GGTCAAATCG
GTTGAAGAGG CCCTGGACCG GCTCCTGTGA
|
|---|
| Protein sequence | MKTMTLYVCQ NCGYQSAKWL GKCPDCSAWN SLVEEVRGKG KGPSAPLSGV APVPICDVAG
EAEERLPCGI SEFDRVLGGG LVAGSVILIG GDPGIGKSTL LLQVMDHLAR TVGPVLYVSG
EESARQARLR GERLGIRAKE LLILAETALE TVLAQIGAVA PRAVVIDSIQ TMYAPGLESA
PGSVSQVREC AGRLMVAAKR SAIPTFIVGH VTKDGSIAGP RVLEHMVDTV LYFEGDRGHA
FRILRAVKNR FGSTNEIGVF EMKEGGLCEV RNPSEIFLSE RPLGVSGSAV VTTIEGSRPL
LVELQALVTP SSLGVPRRTT LGVDANRLAL LVAVLDKKVG LHMAGQDIFL NAAGGARVSE
PAADLGMVAA LASSHLDKVI DPQTVVVGEV GLAGEVRAIT QPETRVREAA KLGFTRAVIP
AGSLKQVTAV EGMEVIGVKS VEEALDRLL
|
|---|
| |