10 homologs were found in PanDaTox collection
for query gene Gmet_3116 on replicon NC_007517
Organism: Geobacter metallireducens GS-15



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_002939  GSU0406  TPR domain-containing protein  58.42 
 
 		 748 aa  754    Geobacter sulfurreducens PCA  Bacteria  normal  0.754061  n/a   
 
 
-
 
NC_007517  Gmet_3116  tetratricopeptide TPR_4  100 
 
 		 700 aa  1397    Geobacter metallireducens GS-15  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008609  Ppro_3422  TPR repeat-containing protein  43.55 
 
 		 713 aa  510  1e-143  Pelobacter propionicus DSM 2379  Bacteria  normal  1  n/a   
 
 
-
 
NC_009483  Gura_4217  TPR repeat-containing protein  40.15 
 
 		 684 aa  496  1e-139  Geobacter uraniireducens Rf4  Bacteria  normal  1  n/a   
 
 
-
 
NC_010814  Glov_3308  Tetratricopeptide domain protein  41.58 
 
 		 714 aa  488  1e-136  Geobacter lovleyi SZ  Bacteria  normal  1  n/a   
 
 
-
 
NC_011146  Gbem_3842  TPR repeat-containing protein  35.4 
 
 		 702 aa  367  1e-100  Geobacter bemidjiensis Bem  Bacteria  normal  1  n/a   
 
 
-
 
NC_012918  GM21_3926  Tetratricopeptide TPR_4  34.62 
 
 		 694 aa  359  9.999999999999999e-98  Geobacter sp. M21  Bacteria  n/a    normal  0.0916918 
 
 
-
 
NC_007498  Pcar_1196  hypothetical protein  20.42 
 
 		 837 aa  65.5  0.000000003  Pelobacter carbinolicus DSM 2380  Bacteria  normal  0.500678  n/a   
 
 
-
 
NC_013223  Dret_0652  hypothetical protein  22.24 
 
 		 833 aa  59.3  0.0000002  Desulfohalobium retbaense DSM 5692  Bacteria  normal  1  normal  0.326198 
 
 
-
 
NC_007519  Dde_2960  TPR repeat-containing protein  24.79 
 
 		 1154 aa  45.1  0.005  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  1  n/a   
 
 
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