| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_3050 |
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| Symbol | |
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| ID | 3741057 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | + |
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| Start bp | 3439706 |
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| End bp | 3445078 |
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| Gene Length | 5373 bp |
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| Protein Length | 1790 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637780339 |
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| Product | superfamily I DNA/RNA helicase |
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| Protein accession | YP_385990 |
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| Protein GI | 78224243 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1112] Superfamily I DNA and RNA helicases and helicase subunits |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 0.266706 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGCCGA GGCCACATTT CAACACATCG ACTGCAGAAC TTGATGCAAT TTACAGAAAA
AATATTGATA ACATCTCAAT ACTCAACGAA ATTCTAAAAG AACTTCACCA TCGCGAAAAA
CCAAAAGCCG TCCAATTACG GAATGAAATT ACCGCTACTT TAGCTAAGAA GAAACAGGGG
AGTACTTCTG TAGCTGATAC CAAGCAACAA GCTGCAGCCC CCAAGCCACT TTCAACGCCA
AGCCAGTCTT CACTTGCATT GACGCCACCA ATTGCTCGTG TAGCACCTGT ACAGACGCAA
TCTCGGTCAG TTTCTCCGCC CACAATACCA GCACCGCCCC ATCCTCCACC CGTCCAATCC
GAACAGCATG CACAGCCGGA ACCACATATA AAAGCCACAA CTGAACCAAC TTCACCACCA
CAATCCCAAT CTCAACCAGT GAGACCGTCA GTGCTCAAGC CACAGCTTAA TAAGCAGCAA
GTACACGTTC TCAATGTGAT CGAGTATCTG TCATCCCTTG CCAGAGTTAA TTCTATAGTA
GTCAGGGATA TCACTAACTA CCAGAACACT CTCTGGCTTT CAGATATCCC CCGCGACGGG
ACAAACTGCT ATTCAAGGAC GTGGGGGGCT GACGAAAGCA TTCCTGACGA TGTATGGCTG
GAAGTGAAAA AAATGCCGGA ACCCCCAATG CCTGCAATCC CCAAGGTTTG TGAGCATTGG
GTTGATGAAT CTCTCCTGCG TAAGATCGAC TTTGTACCCA CTCTTCGGCA ATCGATTGTG
CTGAGCAAAA AGTTTATCGA CCCCGTTACA GGCGAAGAGC ATGAAGAAAT AGAGACAAAA
CAGCTATCTG ACAATCCAGC GGTAGTCATT GCATGGGATG GCTATATTCA GCAAAAATGG
CAACCTTGGA CAACAATCTA CAAAAAGCAC CTTGAAATCC AGAAGGTCTT TGGCGCTCTG
TTCAGTATTT ACCAGGAACA GCAACGTCTT GGCGAGCAAT ATGAACTGGT CGTTGGCCTG
GGGTTGTTGA CATGGCAACA ACCGGGTGGA CAATCAGTGC GTCGGCATTT ATTGGTAGCC
AAGGCCTCTC TCGAATTCGA ATCCGCAATA GGACGGTTTG CCGTAAAACC TGCTCCAGAT
GGCGATCAAT CTGAAGTCGA ACTCGATATG CTTGACCCGG AATCCTATCC AGCAAATTCA
TCGTCACTGA TAGCATCTGG CAGGCAATTG CGGGACAATT TCTGGGACAG AACGATTTCC
AATGCAATAC TGGCTTCCAT ATCGAACTCT CTGGAAAAGC AAGGCAGAGG CAATTATCAG
GCGGAAATCG ACCGTGCAAG CGGTGCCAGT GCTACCGATA TCCCTCTTAT CGAATTCGCT
CCAGCCTTGA TACTGAGAAA ACGGTCTCAA AAAGGGTTGC TAAATATCCT TGCCGATATG
CGTCGACAGG TAGAAATGGG GTTGGAAATA CCGGAGCAGT TCCTTGACCT GTGTGAAGTC
TCAGGTCAGC ATGAAATGGC CAATGGAGGG GATGCGCTGG AAGCTACCCC CCCTGATCAT
ATCTACTTCC CTCTTCCTGC AAACGAACAG CAACGACAGA TAATCTACAA GTACAACAAA
CAGAATGGGG TACTGGTGCA AGGCCCGCCC GGTACCGGTA AATCTCAGAC AATCTCGAAC
CTGATCTGTC ATCTGTTGGC AACCGGGCAA CGGGTCCTTG TAACTGCAAA GACGGCAAGG
GCGCTTGAGG TTCTTCACCA AAAGATTCCT CCCGTCGTAA GTCCACTGTG CATCAGCATG
CTTGGCAGCG GCACGGAAGA ACGTGAATCG CTTGAGCGAA GCGTTAATGG CATTCTGAAC
AACGTCAATA CCCGTAACGA TCTTGTTGCC GCCAGGAAAA TGGAAGAGCT TGAACAAAAA
CTCCATGACA ACAAGAAAGC CGTTGCCGAA GCCCAATATG CATTGATCGC CTTGCGGGAA
AAAGAAACAT TCCAACATAC TCTGGCTGGA GGAGCATATA CCGGTACCGC TGCAACCATT
GCTGTCAAGC TTTTGGAGGA TACCCCCCTA TATAACTGGC TTGATGATGA AATCAGCGAT
AGTGACGAAA TCCCCCTCAC TCGTTCGGAT TTAGACATTT TGTCTGCAAT GCTGCTTGAG
ATCAGTGATG AGATGGAAGC TGAGTACAGC AAGCATGTTC CTGACATTGC CAAAGATATC
CCCGATTGTG AATACCTACG CAACGCATGG CAGGAGCTAA CAAACCATGA GCTTACGGCA
AAAGCCAGCG AAGCCAGGTT AAGTTCCATT TCAGGACAAG CTATAGCACG GGCGGCATAT
GACCAGATCA CCACTCTGAA CGAAACCATG ACCCGTCTTG TAGCTGAAAT ACATAGCGTC
ATGCGTCGTC CTCTGCCATG GGTAAATGGG GCAATCAGGG AAGTACTGGC AGACCTTGAC
ACCCCATGGA AACAGCTGCA CAAGCTCACA ACTGAACGGC TTGGTGAGCT GAAAACACTT
GCGCAAAAAA CTCAGTCTCT TACGGTGGAA ATTCCGGCAT CCATGGATTT GATGAAATTG
CATGGCGATG CCAAGACCCT ACTGGACCAT TTTTCCGCTG GGGGTGGTCT CAAGCAGTTC
GGCTTTTTTG GACATCCAAT AGTAAAAAAA CATGGTGAAT CCGTAAAACA GGTACGGGTG
AACGGTCAGG AATGCGTAGA CAGGAATGTG CTGCCAAAGC TGGTCAGCTA TCTCGAGGTG
AAGTTTCTGT TGAAAGAAAT CTGGTCTTTC TGGGTTGGTA AAGTTACCTG CCAGCCAGAA
AAACACCCAC TAATGCAGAT TGCAGAGATT GATGAGCTGA TTGAAGCACT AGAGCACATT
TTAAGTCTGT ATACGCTCCG CGCAGAAGTT CTTGCGGTAG TCGAAAGGAT TCATGGTCTG
CCCCGTCCAC AATTCGAGAA TGTCGAATCG CTTGATGAGC TTATGAACAC CTGTCAGGAC
GTTCTCAAGC AGTCTGTTCT CAAAGATCTT TATCAAAAAA TGCTGCAGGA AGAAGGTCGC
ATATCGGCTG TAGTCGCCCA TACTAATGCC CATCCGCTTT GTGGCGAGCT TTTCCAGTCA
TTCAAGGTGA GAAACGCAGA CAGTTATTGT GCCGCCGTCA GTAAAATCAA GGCCGTTGGG
GCACAGCGCT CACGGGTCAT AGCAAAACAG GCCTACCTTG ATGCCATTGC CTCAAAAGCC
CCTCGGTTTG CAGCAACCCT GAAAAACGTA CATGATAAAC AGGTTGCCGT GCAACGCCTC
AAGGGATTGG ATAATGCATG GGCATGGAAA CAGGCATCTG ACTGGATGTA CAAGTTCCAT
AATCAGGATG GGAATGTGCT TGAAAGGAAC ATTCACCGCC TTGAAGTCTC ATCAGCAAAG
GCATTGGAAG AACTTGCCGC GCTTAAGGCA TGGTCACACT GTTTTTCCAG AATGACCAGA
GATCATCAGC AACATCTGGT TTCCTGGCAT CAATCCATGC GTCGATTGGG CAAAGGAACG
GGGAAGCATG CTCACAAGCA TCGTCAGGAT GCTCAGAAAA GCCTGAACGA ATGCAAGGGA
GCTGTTCCTT CGTGGATCAT GCCGCTCCAC AGGGTTTATG AAACGGTTGA GGCATCCCCC
GGTTGCTTTG ATGTGATTAT CGTTGACGAA GCATCGCAGT GCGGTTTTGA AGCGTTGCCT
CTTTTGTACC TTGCCAAGAA AATCATTGTT GTTGGTGATG AAAAGCAGAT AAGCCCTGAA
GCTGTCGGTA TTGACAGGTC GCATGTGTTC AACCTGATGC GGACGCACCT TGCCGACTTT
AAACATAGTG CTTCCTTCGA TATTGAGAAC AGCCTGTTTG CCCATGGGCA GATTCGTTTC
GGTAACAGAA TTACCTTGTG CGAGCATTTC AGGTGTGCTC CCGAAATTAT CCGTTTCAGT
AATGAGCTGT GTTACACCTC TGATCCGCTC ATCCCCTTGA AACAAGTCCC ACCGAATCGG
CTTGAACCGT TGAAGGCGGT TCATGTCCCA TCAGGGTACA GGGAAGGCAG TGGACAGACC
ATTGTCAATA AGCCTGAAGC TGAAGCGATA GTTGAGCAAA TCATCAAATG CTGTAAAGAC
AGCAAGTACG ACGGTATGAC GATGGGGGTT ATCGTTCTTC AAGGTGATGC CCAGGCAAAA
ATCATTGAAG ACATGCTAGT AAAGCGGTTG GGTACCGAAG AGATGCAGGA ACGGCGGCTA
TTGTGCGGCA ACCCGTACAG CTTCCAGGGC GATGAGCGCG ATGTTGTCTT TATGAGTATG
GTTGCAGCAA AGAATGAACG GATTGGCGCT TTCACTCAAG ATAAAGACAT GCGGCGCTTC
AACGTTGCTG CAAGTCGTGC AAGGGAACAG ATGTGGCTGT TCCACTCCGT TACCAGTAAC
GATCTCAGCA GCAGTTGCTT CAGAAGACGG CTGTTGAACC ACTTCTATGA TACGTCTGTT
CGCAAGGTAG CCGGAATATC CGTGGAGGAC TTGCAACGGG CTGCCCATAT TGCTGACCGC
TGGCGTGAGC AGCCGCCTGA TCCGTTCGAC AGCTGGTTTG AAGTAGATGT CGCGTTGCAC
ATCGCTGGGC GCGGCTATAC GGTTATTCCG CAATTCGAGT TTGCAGGCAA GAGAATAGAC
CTTGTTATCC AGGGGGGCAG TGCACAGCTT GCCGTCGAAT GCGATGGCGA TCATTGGCAT
GGACGGGACA AATATGAAGA CGATATGCAA CGGCAGCGCA TGCTGGAGCG CTGCAATTGG
GTCTTTTTCA GAATAAAAGA AAGCTATTAC CGCAGTAACA AGGAAAAGAC ACTGGAAGAA
CTTTGGGGAA TGCTTGAAGC AAGGGGCATT TTCCCAAAAG GAAGCGAGCA ATGTTCATCG
GACGAATCAG CCAAAATGGA TTCCGAACCG GCAAACGACC AAGAGGAGTT CGACCAGAAT
GATACAGGTG TAAATGATGA TACGAATGAT ACATCAGATA CAGATGATGT TGATTCCGAA
ATGGATAGTG AAGATGACAT TGGCGAATCG GAAGTGCCTC TAGAAGGTTG TCCACTCTCA
GCTCAAGAGG CGTTGAATGC GAAGCCTGCT GAATTGCGGC GATTGATAAT TGAAGCAATG
AAAACACTGC CGAATAATTC CTGTGTGCGT AAAGCATTAC CAACAATCAT CCTTAGAAAA
TGTCACATCA AAACAAGAGG GACGCCCCGT AAGTTGTTTA CTCGAAAAGT GGAAAGCCAA
GTGGCGGTTA TGATCAGGGA TGGGAAGTTG GTTGCGTATA AAAGCAAAAA TGACCGGTTA
AAGCTTGGGT GGCAATTTGC TACTGAGTCT TAA
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| Protein sequence | MEPRPHFNTS TAELDAIYRK NIDNISILNE ILKELHHREK PKAVQLRNEI TATLAKKKQG
STSVADTKQQ AAAPKPLSTP SQSSLALTPP IARVAPVQTQ SRSVSPPTIP APPHPPPVQS
EQHAQPEPHI KATTEPTSPP QSQSQPVRPS VLKPQLNKQQ VHVLNVIEYL SSLARVNSIV
VRDITNYQNT LWLSDIPRDG TNCYSRTWGA DESIPDDVWL EVKKMPEPPM PAIPKVCEHW
VDESLLRKID FVPTLRQSIV LSKKFIDPVT GEEHEEIETK QLSDNPAVVI AWDGYIQQKW
QPWTTIYKKH LEIQKVFGAL FSIYQEQQRL GEQYELVVGL GLLTWQQPGG QSVRRHLLVA
KASLEFESAI GRFAVKPAPD GDQSEVELDM LDPESYPANS SSLIASGRQL RDNFWDRTIS
NAILASISNS LEKQGRGNYQ AEIDRASGAS ATDIPLIEFA PALILRKRSQ KGLLNILADM
RRQVEMGLEI PEQFLDLCEV SGQHEMANGG DALEATPPDH IYFPLPANEQ QRQIIYKYNK
QNGVLVQGPP GTGKSQTISN LICHLLATGQ RVLVTAKTAR ALEVLHQKIP PVVSPLCISM
LGSGTEERES LERSVNGILN NVNTRNDLVA ARKMEELEQK LHDNKKAVAE AQYALIALRE
KETFQHTLAG GAYTGTAATI AVKLLEDTPL YNWLDDEISD SDEIPLTRSD LDILSAMLLE
ISDEMEAEYS KHVPDIAKDI PDCEYLRNAW QELTNHELTA KASEARLSSI SGQAIARAAY
DQITTLNETM TRLVAEIHSV MRRPLPWVNG AIREVLADLD TPWKQLHKLT TERLGELKTL
AQKTQSLTVE IPASMDLMKL HGDAKTLLDH FSAGGGLKQF GFFGHPIVKK HGESVKQVRV
NGQECVDRNV LPKLVSYLEV KFLLKEIWSF WVGKVTCQPE KHPLMQIAEI DELIEALEHI
LSLYTLRAEV LAVVERIHGL PRPQFENVES LDELMNTCQD VLKQSVLKDL YQKMLQEEGR
ISAVVAHTNA HPLCGELFQS FKVRNADSYC AAVSKIKAVG AQRSRVIAKQ AYLDAIASKA
PRFAATLKNV HDKQVAVQRL KGLDNAWAWK QASDWMYKFH NQDGNVLERN IHRLEVSSAK
ALEELAALKA WSHCFSRMTR DHQQHLVSWH QSMRRLGKGT GKHAHKHRQD AQKSLNECKG
AVPSWIMPLH RVYETVEASP GCFDVIIVDE ASQCGFEALP LLYLAKKIIV VGDEKQISPE
AVGIDRSHVF NLMRTHLADF KHSASFDIEN SLFAHGQIRF GNRITLCEHF RCAPEIIRFS
NELCYTSDPL IPLKQVPPNR LEPLKAVHVP SGYREGSGQT IVNKPEAEAI VEQIIKCCKD
SKYDGMTMGV IVLQGDAQAK IIEDMLVKRL GTEEMQERRL LCGNPYSFQG DERDVVFMSM
VAAKNERIGA FTQDKDMRRF NVAASRAREQ MWLFHSVTSN DLSSSCFRRR LLNHFYDTSV
RKVAGISVED LQRAAHIADR WREQPPDPFD SWFEVDVALH IAGRGYTVIP QFEFAGKRID
LVIQGGSAQL AVECDGDHWH GRDKYEDDMQ RQRMLERCNW VFFRIKESYY RSNKEKTLEE
LWGMLEARGI FPKGSEQCSS DESAKMDSEP ANDQEEFDQN DTGVNDDTND TSDTDDVDSE
MDSEDDIGES EVPLEGCPLS AQEALNAKPA ELRRLIIEAM KTLPNNSCVR KALPTIILRK
CHIKTRGTPR KLFTRKVESQ VAVMIRDGKL VAYKSKNDRL KLGWQFATES
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