Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gmet_2013 |
Symbol | |
ID | 3740670 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter metallireducens GS-15 |
Kingdom | Bacteria |
Replicon accession | NC_007517 |
Strand | - |
Start bp | 2252830 |
End bp | 2253990 |
Gene Length | 1161 bp |
Protein Length | 386 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637779307 |
Product | polysaccharide deacetylase |
Protein accession | YP_384967 |
Protein GI | 78223220 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 43 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 0.191447 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAGCGTGA TGATCCGGAT GATTTGGCAG ACATTGCGCG TTGGCGCGCT CTTTTCTATG ACAACAACCG ATAAAATACT GATTGCCGAG AAAGGCAGAC CCGAATCAAC AGTGATGAAA ATCAAGAAAA CAGTAAAACG CGGCATCTAT TTGATCCTCT ATCATCTCCA TCTGTTCGAC GCGGCATTGG TGGTGGTGTC ATGGCTGCGA AAAGAGCACC CTTGCATTAT TCTCCTCTAT CATCGCATTG TTGATGATCA AACCGTTTAC CTGGATAAGG GGCCGGTGGT TCATCACCAT ATTAGGGATT TCGAGCGAGA GATAGCGTGG CTGAAGAAGC GGTTTCGGGT CTTGAGCATG GATGAAGTAG TTGACACGAT ACGGGGCGGG AAATACTTTG CAAAACCTTC CGTCGCAATT ACTTTCGATG ATGGGTACCT GGATAACTAC ACCCTTGCGT ACCCGGTTCT CAAGTCTCAT GGTGTACCTG CAATGATCTA CCTTGCAACT GGGCTTATCG GAACAAATGC CAGGACATGG CCGGACCAAA TCGAAGCGGC GCTTCTCGCG TCGACAAAGC AGACACTGTC ACTCCCTGGG TTGCTGCCTG ATTGCGGTGC TCCGATCAAG TCAATAGAGG AAAAGCGGAG TTGCTGTATC CAGTTGTCGA GGGTTCTCAA GGGAATGCCC GATGCGGAAA GAAAAATACG ATTGGTGAAT ATTTTTCGCG AACTGGACGT TACGCTGGCA TCGCTCGAAA ACTCCAACAA GAGAACAATG TTGAATTGGG ATGAAGTTAA GGAGATGTCT GCCAACAAGA TTAGTTTCGG CAGCCACAGT CATACGCACC CTATTTTGAG CCGTGTTCCA CTTCACGAGG CTCAGGACGA TATCAGGTAT TCAAAGCAGG TCCTGGAAGT GCAACTTGGC GGTAAGGTAC GACATTTTGC GTATCCCAAC GGGAGAAAAG AAGATTTTTC CGAGGACTTG CGATCGTACT GCAAGAAAAT AGGCTTCGAT ACGGTGGCAA CCGTAGTGTT CGGAACCGTT GACGCTGGGG CTGACCCTTT TTCCCTTAAG CGGATTGGTG TGGTGAGCCC TGTCTGGAAT ATGGCTGGTG AGTTGACGCG AAAGTTTATT CGTCGCGCGG GGGATCGCTG A
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Protein sequence | MSVMIRMIWQ TLRVGALFSM TTTDKILIAE KGRPESTVMK IKKTVKRGIY LILYHLHLFD AALVVVSWLR KEHPCIILLY HRIVDDQTVY LDKGPVVHHH IRDFEREIAW LKKRFRVLSM DEVVDTIRGG KYFAKPSVAI TFDDGYLDNY TLAYPVLKSH GVPAMIYLAT GLIGTNARTW PDQIEAALLA STKQTLSLPG LLPDCGAPIK SIEEKRSCCI QLSRVLKGMP DAERKIRLVN IFRELDVTLA SLENSNKRTM LNWDEVKEMS ANKISFGSHS HTHPILSRVP LHEAQDDIRY SKQVLEVQLG GKVRHFAYPN GRKEDFSEDL RSYCKKIGFD TVATVVFGTV DAGADPFSLK RIGVVSPVWN MAGELTRKFI RRAGDR
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