Gene Gmet_1979 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_1979 
Symbol 
ID3739201 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand
Start bp2208607 
End bp2209428 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content51% 
IMG OID637779273 
Producttransport-associated protein 
Protein accessionYP_384933 
Protein GI78223186 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1102] Cytidylate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.000154767 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value0.0601452 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAATTA TCACTATTTC AAGAGAGATG GGAACCGGCG CCTACCTGAT CGCTCGCGAG 
GTGGCGAAAC GGCTGAAATA TACACTAGTT GACGGTGCAA AGATTGCAGA GCTTGCCCCC
CAGTATGGCC TCGACCGGGA GATATTCAAT CGGGTTGATG AAAAACCGCC AGTGTATATC
ACCGCTGAAG ACAGGCTCCA GGCAGCTCAT CTGAACACCA TCGAGATTAT CATGCTCGAC
TGTGCCCGCA AGGGGAATGT GATTCTCTAC GGGAGGGGTT CCCAGGATCT TCTTGCCGAT
GTTGAAAATA TCCTCCGGCT TCGTTTTGTG GCATCCTTCG AGGATCGGGT GGAAAGCCTT
TCGGAGCGGG AATGGATTGA TCCTGAGTTG GCCCGGGTGC TCATCCGCAA GAGTGATCAT
CAACGGGGTG GTTTCATACA TTTTTACTTT AACCGCGACT GGAACGATAC TTTGGGGTAT
GACCTTGTAT TCAATACCTC GCGCATGTCT CAGGGGGCGA TTGTCGAAAG CATTGTTGCC
GCTGCCAAGG ATCCTCGACT GAAAAACGGC GAAGATAAGA CGCGTGAGAT CGTCGACGAT
ATCATCCTCT GCAAAAAAAT CGAGACCGAA CTCTTTCGTT CAAGCACCAT CGAGAATCTT
CACTTCAAGA TCAGCGCACA AAAGGACGTA GTCCTTCTCT CCGGCCATGT CTATTCTGAT
AGCGAGAGGG AAGACGTGCT TCGCATTGTT GCAGGAGTGA AGGGGGTCAC GAGCATAGAG
GATGACCTGC AGGTGGTAAG CTACAAGCCT TACAAGGAGT GA
 
Protein sequence
MAIITISREM GTGAYLIARE VAKRLKYTLV DGAKIAELAP QYGLDREIFN RVDEKPPVYI 
TAEDRLQAAH LNTIEIIMLD CARKGNVILY GRGSQDLLAD VENILRLRFV ASFEDRVESL
SEREWIDPEL ARVLIRKSDH QRGGFIHFYF NRDWNDTLGY DLVFNTSRMS QGAIVESIVA
AAKDPRLKNG EDKTREIVDD IILCKKIETE LFRSSTIENL HFKISAQKDV VLLSGHVYSD
SEREDVLRIV AGVKGVTSIE DDLQVVSYKP YKE