Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gmet_1979 |
Symbol | |
ID | 3739201 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter metallireducens GS-15 |
Kingdom | Bacteria |
Replicon accession | NC_007517 |
Strand | - |
Start bp | 2208607 |
End bp | 2209428 |
Gene Length | 822 bp |
Protein Length | 273 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 637779273 |
Product | transport-associated protein |
Protein accession | YP_384933 |
Protein GI | 78223186 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG1102] Cytidylate kinase |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.000154767 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 0.0601452 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAATTA TCACTATTTC AAGAGAGATG GGAACCGGCG CCTACCTGAT CGCTCGCGAG GTGGCGAAAC GGCTGAAATA TACACTAGTT GACGGTGCAA AGATTGCAGA GCTTGCCCCC CAGTATGGCC TCGACCGGGA GATATTCAAT CGGGTTGATG AAAAACCGCC AGTGTATATC ACCGCTGAAG ACAGGCTCCA GGCAGCTCAT CTGAACACCA TCGAGATTAT CATGCTCGAC TGTGCCCGCA AGGGGAATGT GATTCTCTAC GGGAGGGGTT CCCAGGATCT TCTTGCCGAT GTTGAAAATA TCCTCCGGCT TCGTTTTGTG GCATCCTTCG AGGATCGGGT GGAAAGCCTT TCGGAGCGGG AATGGATTGA TCCTGAGTTG GCCCGGGTGC TCATCCGCAA GAGTGATCAT CAACGGGGTG GTTTCATACA TTTTTACTTT AACCGCGACT GGAACGATAC TTTGGGGTAT GACCTTGTAT TCAATACCTC GCGCATGTCT CAGGGGGCGA TTGTCGAAAG CATTGTTGCC GCTGCCAAGG ATCCTCGACT GAAAAACGGC GAAGATAAGA CGCGTGAGAT CGTCGACGAT ATCATCCTCT GCAAAAAAAT CGAGACCGAA CTCTTTCGTT CAAGCACCAT CGAGAATCTT CACTTCAAGA TCAGCGCACA AAAGGACGTA GTCCTTCTCT CCGGCCATGT CTATTCTGAT AGCGAGAGGG AAGACGTGCT TCGCATTGTT GCAGGAGTGA AGGGGGTCAC GAGCATAGAG GATGACCTGC AGGTGGTAAG CTACAAGCCT TACAAGGAGT GA
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Protein sequence | MAIITISREM GTGAYLIARE VAKRLKYTLV DGAKIAELAP QYGLDREIFN RVDEKPPVYI TAEDRLQAAH LNTIEIIMLD CARKGNVILY GRGSQDLLAD VENILRLRFV ASFEDRVESL SEREWIDPEL ARVLIRKSDH QRGGFIHFYF NRDWNDTLGY DLVFNTSRMS QGAIVESIVA AAKDPRLKNG EDKTREIVDD IILCKKIETE LFRSSTIENL HFKISAQKDV VLLSGHVYSD SEREDVLRIV AGVKGVTSIE DDLQVVSYKP YKE
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