| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_1665 |
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| Symbol | |
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| ID | 3740515 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | - |
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| Start bp | 1869273 |
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| End bp | 1870469 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637778950 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_384621 |
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| Protein GI | 78222874 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.454837 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 0.558289 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTCGCG GAATGAAAAC CACTTTCCAA CCCTTACATT GCCTTGTGCT CTGGGTCCTG
CCACTTCTCG CCCTTCTTCA GGCCGGATGC AAGAAGCCCC CGCCGCCCCC TCCCCCGCCC
CCGAAGGTGA CCGTTTCTCA CCCCCTGAAA CGTGAAGTTA CCGATTACCT GGAACTGACC
GGCAACACCC AGGCCGTCAA CTCTGTGCAG TTGGTCGCTC GTGTTCCCGG GTATCTTGAG
AAGGTCTTTT TCCGGGACGG GCAGATGGTC ACCAATGGGC AACCGCTCTT TCAGCTACAG
CGGAACACCT ATGAGGCCGC CCTCCGCCAG GCCGAAGGCC AGGTCATGGC GCTGAAATCG
CAGCTTGAGT ACGCCGAAGG TCAACTGATC CGCTACTCCA ACCTGTTGCC CCATAAGGCC
GCTACCCAGA CTGACGTGGA CAACTGGAGA TACCAGCGGG ACTCCGCCAG GGCTAACCTG
AAAGCCGCGG AGGCGAATCG GGACCTCGCA AGGCTCAATC TTGGCTACAC CCTGGTCTCG
GCCCCCTTTA GCGGACGGAT AGATCGGAGA CAGCAGGATC CGGGAAATCT GGTGGGCTCT
GAAACGAACA ACACCGTTCT TGCCCAACTC ATCCAGATCG ACCCCATTTA CGTGTATTTC
ACGGTCAGCG ACCTGGACCT GGCCCGGTTG CTCAAGACAA ACCGTCTTCC CGGCGTTGCC
AAAACAGAAA AACGCCCGGT TTTTATCGCC CTTGCACAGG AAGAGGGTTA TTCGCACAAG
GGTTATGTCG ATTTTGCCGC CACAAGCCTC ACCCCTACCA CCGGAACGCT GCTGTTACGG
GGCGTCTTCC GGAATCCGTC AGGAAGGATA CTCCCCGGAT TGTACGCGAA GGTCCGTCTC
CCGCTGGAGA GAAGGGTCGC TCTCCTGACT CCCGACACGG CAATAAGAAG CGACCAGCAG
GGGTCGTACG TGCTGACCGT GAACGGCAAA AATACGGTGG AGCGGCGCGC CGTCAAGACA
GGCCACCAGG AGGATTCCCT GCGCGTGATC GAACAAGGCC TTGACGGAAG CGAATGGGTC
ATCGTCAAAG GACAGCTGAA AGCCCCCTCT GGAAGCCGTG TAACCCCCGT ACGGGAGGAT
GCGGAGCCTG CGTCTGCCCC TTCCCGCACC ACCGCGGGAC CGAAGGTCAA GCCGTGA
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| Protein sequence | MFRGMKTTFQ PLHCLVLWVL PLLALLQAGC KKPPPPPPPP PKVTVSHPLK REVTDYLELT
GNTQAVNSVQ LVARVPGYLE KVFFRDGQMV TNGQPLFQLQ RNTYEAALRQ AEGQVMALKS
QLEYAEGQLI RYSNLLPHKA ATQTDVDNWR YQRDSARANL KAAEANRDLA RLNLGYTLVS
APFSGRIDRR QQDPGNLVGS ETNNTVLAQL IQIDPIYVYF TVSDLDLARL LKTNRLPGVA
KTEKRPVFIA LAQEEGYSHK GYVDFAATSL TPTTGTLLLR GVFRNPSGRI LPGLYAKVRL
PLERRVALLT PDTAIRSDQQ GSYVLTVNGK NTVERRAVKT GHQEDSLRVI EQGLDGSEWV
IVKGQLKAPS GSRVTPVRED AEPASAPSRT TAGPKVKP
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