| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_0588 |
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| Symbol | |
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| ID | 3740597 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | + |
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| Start bp | 653772 |
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| End bp | 655613 |
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| Gene Length | 1842 bp |
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| Protein Length | 613 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637777862 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_383556 |
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| Protein GI | 78221809 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 60 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 64 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAATTTCT TTTCTCTGAA ACGGGAACAG GCGCTGGATT TCGTCTGCCT TGCGGTGGTG
GTCCTGGCTG TGTATGGGAG AGCCCTTGGC CATGATTTCC AGACCAACTG GGATGACAAC
TGGTATGTGC TCTATAACGA AGCCGTGCGC GGTTTTTCAT GGGACCATAT CCGCAGCGCA
TTCACCGGTT ACTTCGGCGG ATATTACGCC CCGGTGCAGG TCGTTTCGTA CATGCTTGAC
TATTCGCTCT GGGGGCTCTG GCCCGGCGGC TTCATCCTGA CGAACATCCT GCTGCACCTG
CTGAACGGGC TCCTGATCTA CCGGTTGCTC CTCGGTTGGT ACGGGCAGCG TCTGGTTGCT
CTGGTGGCAT CGGCAATTTT CCTGGTTCAT CCGGTCCAGG TCGAGGCCGT TGCCTGGATC
TCCCAGAGAA AATCACTCCT GGCCCTGCTC TTCTTCCTGA TCGCCTGGAA ACAGTACTGC
CGCTATCGCC TGGCCCCGAC AGGGAGAGGA CGATGGAGCT ATGGGGCATC CTGCGGCGCG
TTCCTGTTAT CGTTGCTGGC CAAGCCGACC ACGGTGGTCC TTCCCGTAAT CCTGGTGCTG
TACGACCACT GCTTTGCCGA TGGGGACCGA CGGTCCCGGT ATGCGGACAA GGTTCCCTAC
GTGCTGCTGG CCGGCATTTT TTCTGCCCTG ACCCTCTATA CCCAGTCGCC GGAGGTGGCG
GAAGGTGGCC GCACCGCCTA CCACGGCGGG AGTCCCCTGG GGACGCTCTA CACGATGCTC
CCCGTGTTCT GCCGTTATCT GGAAATGCTG GTCTGGCCCG CCGGCCTCAG TGCCGCCTAT
GCTCCCCCGA TCCGGCAGGC CGTTGACGCC ACAGTGGTCC TGTCGGCCCT CCTCCTTGCC
GGCATCGCCG TGGCCTCGGT CCGGCTGTAT CGGGTCGACC GGCGGCTCGC CTTCTGGGTC
CTCTTTTTCT GGGTCGGGCT CCTGCCGGTT TCCCAGATCG TGCCGGTCAT CTCGCTGCTG
TACGACCACT ATCTCTATCT CCCAATCATC GGCGCGGCCG CCTTGGCCGG ATCGGGCGGG
GCACTGCTGT GGGAGCGCCT GGCACCGGAG CGCCGTTTCC TGCTCTATGC GGTTGTGCTG
CCGGTGCTGG CGGCCCTTTC CGTGGCCTCT TTTCAGCGGA CCGGCGTCTG GAAGAATTCC
CTGACCCTCT GGAGCGATGC CGTTGCCAAG GAACCGGGGA GCGATCTGGC ATGGCAGATC
CTGGGTGGAT CGCTATTGGA CGTTGGCAGG ATTGCGGAGG CCAGGGAGGC TTATCAGCGG
GGCTTTGCGC TCAATCGGTC AAATACGGAG ATCCTCCATG CCCTGGGGCA GATTGCCACC
AACACGGGGG AGCTTGACCA GGGATACCGG ATGCTGAAGA GGCTCCTGGA GCTGAAGCCC
GATTACGTCT CCGGCTGGGC CAGTCTTGGC ACCAATTACA TGAAACGGGG CGACTACGGG
GAGGCTGAAA GGGCATACCA GCGCGCACAC TCTTTGCAAC CGGAGGCGTG GCAGGTGGTG
TCCTTGCTGG GGAATCTGGC GCTGACCCGG GGGCGCCTGG AAGAGGCCCG CGGATACTTC
GTGCAGGTGG AGGCACAGGC GCCGGGGGAC GCCGCCAATG CCTATGCCCT GGCGAGCGTC
GAGGCCCTGT CGGGCAATGC CGATGCCGGC CTCGCCTGGC TGGAGAAGGC CGTGCAGCGG
GGGTACGACG ACTTCGGACG GATGTACGAC GATCCGCGGC TGTCGGCCCT GCGGGACAGC
CCGCGCTTCG ACCGCCTGGT GCGGAACAAT GCTGGAAGAT AG
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| Protein sequence | MNFFSLKREQ ALDFVCLAVV VLAVYGRALG HDFQTNWDDN WYVLYNEAVR GFSWDHIRSA
FTGYFGGYYA PVQVVSYMLD YSLWGLWPGG FILTNILLHL LNGLLIYRLL LGWYGQRLVA
LVASAIFLVH PVQVEAVAWI SQRKSLLALL FFLIAWKQYC RYRLAPTGRG RWSYGASCGA
FLLSLLAKPT TVVLPVILVL YDHCFADGDR RSRYADKVPY VLLAGIFSAL TLYTQSPEVA
EGGRTAYHGG SPLGTLYTML PVFCRYLEML VWPAGLSAAY APPIRQAVDA TVVLSALLLA
GIAVASVRLY RVDRRLAFWV LFFWVGLLPV SQIVPVISLL YDHYLYLPII GAAALAGSGG
ALLWERLAPE RRFLLYAVVL PVLAALSVAS FQRTGVWKNS LTLWSDAVAK EPGSDLAWQI
LGGSLLDVGR IAEAREAYQR GFALNRSNTE ILHALGQIAT NTGELDQGYR MLKRLLELKP
DYVSGWASLG TNYMKRGDYG EAERAYQRAH SLQPEAWQVV SLLGNLALTR GRLEEARGYF
VQVEAQAPGD AANAYALASV EALSGNADAG LAWLEKAVQR GYDDFGRMYD DPRLSALRDS
PRFDRLVRNN AGR
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