| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_0016 |
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| Symbol | hemE |
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| ID | 3739918 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | + |
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| Start bp | 23372 |
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| End bp | 24394 |
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| Gene Length | 1023 bp |
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| Protein Length | 340 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637777295 |
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| Product | uroporphyrinogen decarboxylase |
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| Protein accession | YP_382991 |
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| Protein GI | 78221244 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0407] Uroporphyrinogen-III decarboxylase |
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| TIGRFAM ID | [TIGR01464] uroporphyrinogen decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 0.87416 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 56 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATAATC GTTTTCTCGA CGCCTGCTGG GGCAAGCCCG TTGACCGTAC CCCCGTGTGG
CTCATGCGGC AGGCCGGGCG CTACCTCCCC GAATACATGG CGGTGCGCTC CAAGTGCACC
TTCCTGGAGC TTTGCAAGAC CCCGGAGCTG GCCGCCGAGG TGACTCTCCA GCCGGTGGAT
ATCCTGGGGG TCGACGCGGC GATCCTCTTT TCCGACATCC TGACGCCGGT GGAGCCCATG
GGGCTCAAGC TCGATTTTGT CCCCGGCCCG GTCTTCGAGA CCCCGGTCCG GACCATGGCC
GACGTGGAGC GGCTCCGGAT CCCCAACCCC GAGGAGGATG TCCCCTACGT CCTCGACACC
ATCAAGATTC TCCGCAAGGA GTTGGCCGGC CGGGTGCCCC TCATCGGCTT CGGCGGCGCC
CCGTTCACCC TGGCCTGCTA CATGGTGGAG GGGAAGGGGT CCAAGGACTG GGCCACCATC
AAGCGGATGA TGTACGCCGC CCCCGAGGTC TACGCCGCCC TCATGGATAA GGTGACCATG
ATGGACATGG AGTACCTGAA CGCCCAGATC CGGGCCGGAG CCCAAGCGAT CCAGATCTTC
GACACCTGGG GCGGGGTCCT CTCCCCCACC GATTACGAGA AATTTGTCCT TCCCTACACC
CGGAAGCTCA TCAATGGCCT GAACCGCCAG AACACTCCCG TCATCCACTT CGTCAAGGGG
GCCGGCACCA TGCTGGAGAC GGTGCAGAAG GCCGGCGGCG ACGTCATGGG GCTCGACTGG
CACGTGAACC TGGGGAAAGC CCGGGACGTG CTTGGCCCGA ACATGGCCGT CCAGGGGAAC
CTGGACCCCA CGGTCCTCTA CGCTCCCAAG GAGGTGATCG AGGTGGAGGT GAAGCGGGTT
CTCGACGAGA ACGCCGGTCG CCCGGGCCAC ATCTTCAACC TGGGGCACGG CATCCTCCCC
ACGGTGCCGC CCGAGAACGC CATCCACATG GTCGAATGCG TGCACCGGCT GTCACAGAAG
TAG
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| Protein sequence | MNNRFLDACW GKPVDRTPVW LMRQAGRYLP EYMAVRSKCT FLELCKTPEL AAEVTLQPVD
ILGVDAAILF SDILTPVEPM GLKLDFVPGP VFETPVRTMA DVERLRIPNP EEDVPYVLDT
IKILRKELAG RVPLIGFGGA PFTLACYMVE GKGSKDWATI KRMMYAAPEV YAALMDKVTM
MDMEYLNAQI RAGAQAIQIF DTWGGVLSPT DYEKFVLPYT RKLINGLNRQ NTPVIHFVKG
AGTMLETVQK AGGDVMGLDW HVNLGKARDV LGPNMAVQGN LDPTVLYAPK EVIEVEVKRV
LDENAGRPGH IFNLGHGILP TVPPENAIHM VECVHRLSQK
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