| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_3571 |
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| Symbol | |
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| ID | 6973377 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011367 |
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| Strand | - |
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| Start bp | 18630 |
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| End bp | 21707 |
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| Gene Length | 3078 bp |
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| Protein Length | 1025 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 643393540 |
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| Product | conjugal transfer relaxase TraA |
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| Protein accession | YP_002278358 |
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| Protein GI | 209542177 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member |
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| TIGRFAM ID | [TIGR02768] Ti-type conjugative transfer relaxase TraA |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTGATA GTGTCGTGTC CATGGCGATC TACCACCTGC ATGCGAAACT GATCAGCCGT
GCGACCGGCC GGAGCGCGGT CGCGGCGGCG GCCTATCGCT CGGCGTCGCG CCTGCATGAT
GATCGCCTGG ATCGCGCACA CGATTTCACC AACAAGAGCG GAGTGGTGCA TTCCGAGATC
CTGCTGCCGG ACGGTGCGCC GAAGCGCCTT GCCGATCGTT CGACGCTGTG GAACGAGGTC
GAGGCGATCG AGAAGCGCAA GGACGCGCAG CTTTCCCGCG AAGTGGAGTT CTCGATCCCG
CGCGAGATGA CCCAGGAACA GGGGATCGGG CTGGCACGGG ATTTCGTGCG CGAGCAGTTC
GTCGATCGCG GGATGGTAGC CGATCTGAAT GTGCATTGGG ATATCGGCGA GGACGGACTG
GCGAAGCCGC ATGCGCATGT GATGCTGTCC ACGCGGACGG TGGACGAGAC CGGTTTCGGG
GCGAAGGGGC GAGAGTGGAA CAGCAAGGCA CTGCTGGCTG AATGGCGGGA GCGTTGGGCG
TCGCTGGCCA ATGAGCGGCT GGTGGAGATC GGGCTGGATG TGCGGATCGA TCATCGGTCG
TTTGCCGAGC AGGGGATCGA CCTGGAGCCG CAGAACAAGA TCGGGCCGGC GGGGATGCGT
CGGGAAGAGC GTGGCGAGGA TGCGGAGCGG GCGGCCGATC ATGAGGAGAT CGCGCGACGG
AACGGGGAGC GGCTGATCGC GGAGCCGTCG CTGGCGCTGG AGGCGCTGAC GCGGCAGCAG
AGCACGTTCA CCCGGCAGGA TCTGGCGCGG TTCGTCGATC GGCAGACGGC GGACGCCGAG
CAGTTTGCCG CCGCCATGGC GAAGGTGGAG GCCTCGCCCG AACTGGTGGC GCTGGGGAAG
GACGGTCGGG GCCGGGCGCG GTATTCCACG CGCGCGATGG TGGCGGTGGA GCGGCGGCTG
GAAGAGGCAT CGCTGGAACT GGGTGGGCGA ACCTCGCATG GGGTACCGCT TGCGGTGCGG
CGGGCGGCGA TGACGCGGGA AGGGCTGGGG GAAGAGCAGG CGCTGGCGGT TGGCGAGGTC
ACGCGGTCGC GGGATCTGTC GGTGGTGATC GGCTATGCCG GCACGGGGAA GAGCACCATG
CTGGGGGTGG CCCGCGAGGC GTGGGAAGAG GCCGGCTACC GCGTGCGCGG GGCGGCGCTG
TCGGGGATCG CGGCCGAGGG GCTGGAAGCC GGGTCGGGGA TCGAGAGCCG GACGCTGGCG
TCGCTGGAAC GTGGCTGGGA AAAGGGGTTC GACCTGCTGG AGTGCGGGGA CGTGCTGGTG
GTGGACGAGG CCGGGATGGT GGGCTCGCGG CAGCTGGAGC GGGTGCTGTC GGCCGCGCGG
GATGCCGGCG CGAAGGTGGT GCTGGTGGGC GATCCGGAGC AGCTCCAGGC GATCGAGGCG
GGCGGGGCGT TCCGGGCGGT GGCCGAGCGG GTCGGGTCGG TGGAGATCAC GGCCGTCCGC
CGGCAGCGCG CGGGCTGGCA GCAGGAGGCC ACGAAGGAGC TGGCGACCGG GCGGACGGAG
GCGGCGCTGG ACCGCTACGA GGCGGCCGGG ATGGTGCATG GGCATGACAC GCTGGAGGAG
GCGCGTGCCG GCGTGGTGGC GGAGTGGGAT GCGGCCCGGC GGGCCGCGCC GGGCGAGCGT
TCGATCATGC TGGCGCATCG TCGGGTGGAT GTACAGGCGT TGAACGAGGC GGCGCGGGCG
ATCCGTCTGG AGGTCGGCGA GTTGGAGGCG GGTGTCGAGG TCACGGTGGC GACGGCCCAG
GGCGACCGGC AGTTCGCGAT CGAGGAGCGG GTGTATTTCC TGCGTAACGA CCGGGGTCTC
GGGGTGAAGA ACGGGACGCT GGGGACGGTG CGCGGCCTGT ACGGGATGGA TGAGGAGAAG
GTTCTGCTGT CGGTGCAGCT TGATGGGCCG GCCGGGCCTG GCACCGGCCA GATCGTGTCA
GTGCGGACGT GGGAGTATGA CGCGCTGGAC CATGGGTATG CGGCGACGAT CCACAAATCC
CAGGGGGTGA CGGTGGACCG GGTGCATGCG CTGGGGACGG GGAGCATGGA CCGGCACGGG
GCCTATGTCG TGCTGTCGCG GCATCGGGAC CGGGTGGATT TGCATTGGGC TCGGGACGAT
GTGGGCAGCC GCGAGGGGCT GGTGGCGAAG CTGTCGCGCG AGCGGCTGAA GGATACCACG
CTGGATTATG GTCCGGGTCG TGGGGCGGAG CGGGACGCCA CGGCCGCGTA TGCGCGGCGG
CGGGGCTTCC GGGTGCCGGA GAGCGAGATC GGGGTGGAGC GTGCGGCCGC ACGGGAAGAG
CCGGATCGGT CGGCCGGCGC CGACGCGGCG CCGGTGCGCG GGCGTGGGAT GTTTGACGGG
CTGGTGCTCA ATGCCCGGCC GGTGTCGGGG CGTGACGCGG CGGCCGGGAA GGAGAAGGAG
GCCGGGCGAG AGGCGCCGGC GTCTCCCTTC GCGGGGCTGA AGTTGAATCC GGATCGGCGG
GAGCGGTTGC CTGCTGTGGT GGGGATGACG CCGGGAGACG ATCCGCTGGT GAAGGCGGTG
AACCGCTATG CGCGGGCGTG GATGGATGCC GGGCGGATGA TGGAGCAGGG CCTGCCGGTG
CTGGAGCATC AGAAGCGGAC GCTGCACGAA GCCGGCGTTG GGCTCGACCA GGTGCGGCGT
GGCGCGGTCG AGGATCTGGC GTCGGCGCTG AAGCATGAGC CGGCGATCCG CGACGCCATG
CGCGAGATGG AGGGGCTGGC GCGGGCGCGG ACGCTGATCG AGGGGATCGA GCGGGAAGAG
ACAATCCGCC GCTCGCCTGA CTTGCGGGCG GCGCGGTTCG TGCGGGAATG GGACGGGTTG
AGTCGCGAGC AGCGCGGCGA TGCCCTGAAG GAGTTGAAGC GCGACGCGCA GCTTGAATCG
CTGATGCGGG AGAAGAAGCG GGCATTGGGG ATCGCGCCGG GGTCCGATCT GGACCAGGCG
TTGCGCCGGC AGCGCGAGCA GTCGATCACG CGCACGATTT CGCGGTCGCG CGGGCGTGGC
ATGGATATGG GGATGTAG
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| Protein sequence | MRDSVVSMAI YHLHAKLISR ATGRSAVAAA AYRSASRLHD DRLDRAHDFT NKSGVVHSEI
LLPDGAPKRL ADRSTLWNEV EAIEKRKDAQ LSREVEFSIP REMTQEQGIG LARDFVREQF
VDRGMVADLN VHWDIGEDGL AKPHAHVMLS TRTVDETGFG AKGREWNSKA LLAEWRERWA
SLANERLVEI GLDVRIDHRS FAEQGIDLEP QNKIGPAGMR REERGEDAER AADHEEIARR
NGERLIAEPS LALEALTRQQ STFTRQDLAR FVDRQTADAE QFAAAMAKVE ASPELVALGK
DGRGRARYST RAMVAVERRL EEASLELGGR TSHGVPLAVR RAAMTREGLG EEQALAVGEV
TRSRDLSVVI GYAGTGKSTM LGVAREAWEE AGYRVRGAAL SGIAAEGLEA GSGIESRTLA
SLERGWEKGF DLLECGDVLV VDEAGMVGSR QLERVLSAAR DAGAKVVLVG DPEQLQAIEA
GGAFRAVAER VGSVEITAVR RQRAGWQQEA TKELATGRTE AALDRYEAAG MVHGHDTLEE
ARAGVVAEWD AARRAAPGER SIMLAHRRVD VQALNEAARA IRLEVGELEA GVEVTVATAQ
GDRQFAIEER VYFLRNDRGL GVKNGTLGTV RGLYGMDEEK VLLSVQLDGP AGPGTGQIVS
VRTWEYDALD HGYAATIHKS QGVTVDRVHA LGTGSMDRHG AYVVLSRHRD RVDLHWARDD
VGSREGLVAK LSRERLKDTT LDYGPGRGAE RDATAAYARR RGFRVPESEI GVERAAAREE
PDRSAGADAA PVRGRGMFDG LVLNARPVSG RDAAAGKEKE AGREAPASPF AGLKLNPDRR
ERLPAVVGMT PGDDPLVKAV NRYARAWMDA GRMMEQGLPV LEHQKRTLHE AGVGLDQVRR
GAVEDLASAL KHEPAIRDAM REMEGLARAR TLIEGIEREE TIRRSPDLRA ARFVREWDGL
SREQRGDALK ELKRDAQLES LMREKKRALG IAPGSDLDQA LRRQREQSIT RTISRSRGRG
MDMGM
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