| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_1645 |
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| Symbol | |
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| ID | 6975061 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011365 |
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| Strand | + |
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| Start bp | 1830787 |
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| End bp | 1833561 |
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| Gene Length | 2775 bp |
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| Protein Length | 924 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 643391180 |
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| Product | DNA topoisomerase I |
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| Protein accession | YP_002276037 |
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| Protein GI | 209543808 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0550] Topoisomerase IA |
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| TIGRFAM ID | [TIGR01051] DNA topoisomerase I, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 0.247282 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGACG TCGTCGTGGT CGAGTCGCCT GCCAAGGCGA AGACGATCAA CAAGTATCTG
GGGGACGGAT TCACGGTTCT TGCCTCGTTC GGCCATGTCC GCGACCTGCC GCCGAAGGAT
GGCAGCGTCC GCCCCGACGA GAATTTCGCC ATGGACTGGC AGGCCGACGA GCGCGGCAGC
CGGCAGATGG CCGCGATCGC CAAGGCGTTG CGCGGGGCGC GGCATCTGTA CCTGGCCACT
GACCCGGATC GCGAGGGCGA GGCGATTTCC TGGCATGTCC GCGCGATGCT GGAGGAAAAG
AACCTGCTGA AGGGGGTGGA CGTCCAGCGC GTCACCTTCA ACGAGATCAC CAAGAGCGCC
ATCCGCGCCG CGATGGCCCA GCCGCGCGAC CTGGACCAGC CGCTGATCGA GGCCTATCTG
GCCCGGCGCG CGCTGGATTA CCTGGTGGGC TTCACCCTGT CGCCCGTGCT GTGGCGCAAG
CTGCCGGGGT CGCGCAGCGC CGGCCGGGTA CAGTCGGTCG CCCTGCGCCT GATCTGCGAG
CGCGAGGCGG AGATCGAGAG CTTCCGCGCC CGCGAATACT GGACGGTGGC CGCGCAGTTC
ACCACGCCCG GCGGCGCGGC CTTCACCGCG CGGCTGACGC ACCTGGCCGG CCGCAAGCTG
GACCAGTTCG ACCTGCATGA CGAAGCCGGG GCCATGGCGG CCAAGGCGGC CGTCGAGGCC
GGGCGCTTCG CCGTGCAGTC GGTGGAACGG CGCAAGGTCC GCCGCAACCC GCCGCCGCCC
TTCACGACCT CGACCATGCA GCAGGAAGCG TCGCGCAAGC TGGGCATGGG CGCGCAGGGC
ACCATGCGCA CCGCCCAGCA GCTGTACGAA GGCATCGACC TGGGCGGCGA GACGGTCGGT
CTGATCACCT ATATGCGAAC CGATGGCGTG CAGATGGCCG GCGAGGCCAT CGCCGCCATC
CGCGGCCATA TCGGCGAGAG CTTCGGCGCG CCCTACGTGC CCGAGAAGGC CCGGATCTAT
TCCACCAAGG CGAAGAACGC CCAGGAAGCG CACGAGGCGA TCCGCCCCAC CGATGTCAGC
CGCACCCCGG CGCAGATGGC CCGCTACCTG AATGACGAGC AGCGGCGGCT GTACGAACTG
ATCTGGAAAC GGTCGGTCGC CAGCCAGATG CAGTCGGCCG AACTGGACCA GGTGATCGTC
GAGATCGCGG ATGCCGGAGG GGCCGCCACC CTGCGCGCCA CCGGGTCGAT GATCGCCTTC
GACGGGTTCC TGAAGCTGTA CAGCGAAGGC CGGGACGACG CCGCGCCGAA GGACGAGCAG
GACGACGACA GCCGCATGCT GCCGCCGATG CGCGAGCGCG ACGCGCTGAA AACCGGCGAG
GTCGCGGCCG ACCAGCATTT CACCCAGCCG CCGCCGCGCT TCTCCGAAGC GTCGCTGGTC
AAGAAGATGG AAGAGATCGG GATCGGCCGG CCGTCGACCT ATGCCTCGAT CCTGACGGTG
CTGCGCGACC GCAATTACGT GCGGCTGGAT GCCCGCCGCT TCGTCCCCGA GGACCGGGGG
CGGCTGGTCA CCGCGTTCCT GACCTCGTTC TTCGAACGCT ATGTGGACAC GCAGTTCACG
GCGGGGCTGG AAGAGCAGCT GGACGACATA TCCGGTGGGC GGGCCGACTG GCGCGACGTG
ATGTCGGCCT TCTGGCAGGA TTTTTCCCGC GCGGTGGACC AGACGAAGGA TCTGAAGATC
TCCGACGTCA TCAGCGCGCT GGATGCCGAC CTGGCGCCGC ATTTCTTCCC CGCGCACCTC
GACGGCAGCG ATCCGCGCGT CTGCACCGCC TGCGGCACCG GGCGGCTGGG GCTGAAGCTG
GGGCGGTACG GCGCCTTCAT CGGCTGTTCC AACTATCCGA CCTGCCAGTT CACCCGCCGC
CTGGTGGTGG ACCCCAAGGA GGACGGCGAG GCCGACACGC TGAAGGACGG CATGCGCCTG
CTGGGCCAGA CGCCCGGCGG CGAGGATGTG ACCGTGCGGC GCGGCCCGTG GGGCCTGTAC
GTCCAGCAGG GCGAACCCGA CCCCGAGGAC AAGAAGGCCA AGCCCCGGCG CGCCACCATT
CCGCGCGGGA TCGAAGGCGA CAAGATCACG CTGGACCAGG CGCTGGGCCT GCTCTCGCTG
CCGCGGGTCG TCGGCATCCA TCCGGAAACC GGCGAGCAGA TCGAGGCCGG GCTTGGCCGC
TTCGGGCCAT ACGTGAAGAT GGGCGCGGTC TATGGATCGC TGGACAAGGA TGACGACATC
CTGACGGTCG GGCTGAACCG GGCGGTGGAC GTGCTGGCCC GCAAGCTGGC CTCGGTCCGC
ACCATCGCGC CGCACCCCAA GGATGGCGAG CCGGTGATCG TCCGCAAGGG ACGGTTCGGA
CCGTATATCC AGCATGGCAC GATGGTGGTG AACGTGCCCC GGGGCGAGGC CATGGAGGAC
GTGACCCTGG ACCAGGCGGT GGCGCTGCTG GCCGAAAAGG GCAAGCCGCT GAAGCCCAAG
GGCAAGGCCG CGGCGAAGAA GGCCCCCGCC CGGAAGACGG CCGCCAGGAA GGCGCCGGCC
AAGACCGCGG CGAAGAAAGC CGCCCCGGAC GGGGATGCCG ATACGCAGGC CAGGGCCGCG
AAACCCCCGG CGCGCAAGGC CGCCGCCCGC AAGACCCCGG CCGGCAAGGC AACGGGCAAG
ACCGCGAAGG GCAAGGCCGA ACCCGGCGAG GGTGCCGGGC CCCGCACGCG GCGCACGGCG
ACCGAGGCCG GCTGA
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| Protein sequence | MTDVVVVESP AKAKTINKYL GDGFTVLASF GHVRDLPPKD GSVRPDENFA MDWQADERGS
RQMAAIAKAL RGARHLYLAT DPDREGEAIS WHVRAMLEEK NLLKGVDVQR VTFNEITKSA
IRAAMAQPRD LDQPLIEAYL ARRALDYLVG FTLSPVLWRK LPGSRSAGRV QSVALRLICE
REAEIESFRA REYWTVAAQF TTPGGAAFTA RLTHLAGRKL DQFDLHDEAG AMAAKAAVEA
GRFAVQSVER RKVRRNPPPP FTTSTMQQEA SRKLGMGAQG TMRTAQQLYE GIDLGGETVG
LITYMRTDGV QMAGEAIAAI RGHIGESFGA PYVPEKARIY STKAKNAQEA HEAIRPTDVS
RTPAQMARYL NDEQRRLYEL IWKRSVASQM QSAELDQVIV EIADAGGAAT LRATGSMIAF
DGFLKLYSEG RDDAAPKDEQ DDDSRMLPPM RERDALKTGE VAADQHFTQP PPRFSEASLV
KKMEEIGIGR PSTYASILTV LRDRNYVRLD ARRFVPEDRG RLVTAFLTSF FERYVDTQFT
AGLEEQLDDI SGGRADWRDV MSAFWQDFSR AVDQTKDLKI SDVISALDAD LAPHFFPAHL
DGSDPRVCTA CGTGRLGLKL GRYGAFIGCS NYPTCQFTRR LVVDPKEDGE ADTLKDGMRL
LGQTPGGEDV TVRRGPWGLY VQQGEPDPED KKAKPRRATI PRGIEGDKIT LDQALGLLSL
PRVVGIHPET GEQIEAGLGR FGPYVKMGAV YGSLDKDDDI LTVGLNRAVD VLARKLASVR
TIAPHPKDGE PVIVRKGRFG PYIQHGTMVV NVPRGEAMED VTLDQAVALL AEKGKPLKPK
GKAAAKKAPA RKTAARKAPA KTAAKKAAPD GDADTQARAA KPPARKAAAR KTPAGKATGK
TAKGKAEPGE GAGPRTRRTA TEAG
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