Gene Gdia_1082 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGdia_1082 
Symbol 
ID6974485 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGluconacetobacter diazotrophicus PAl 5 
KingdomBacteria 
Replicon accessionNC_011365 
Strand
Start bp1217969 
End bp1218427 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content71% 
IMG OID643390610 
Productprotein of unknown function DUF163 
Protein accessionYP_002275480 
Protein GI209543251 
COG category[S] Function unknown 
COG ID[COG1576] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00246] rRNA large subunit m3Psi methyltransferase RlmH 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones62 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGCTGA TCGCCGTCGG CCGCATGAAG GACCGGGTGG AGCGCGATCT GTTCCAGCGC 
TACGCCGAAC GGCTGAGCCC GCGCCTGGAT CTGGTCGAGG TGGCCGAGGG CAGGGGCGCA
CCCGCCGAGA TCAAGCGGCG GGAAGGGCAG GCCCTGCTGT CGGCCCTGCC CGACCGGGCC
TTCGCCGTGG CGTTGGACGA GGGCGGCCGT GCCCACGATA GCCTGGCCTT CGCGCGGGTC
CTGGAACGCT GGCTGGGCCT GTCCCGCCCG GTCTGCTTCC TGGTCGGCGG TGCCGAGGGA
TTGGATGGCC CCGTCCTGGC GCGCGCCGAC GACACCCTGT CGCTGGGCCC GATGACCTGG
CCGCACATGC TGATCCGGGG ATTATTGGCT GAACAGCTCT ACCGGGCGCG TGCGATAGCC
TCGGGGCATC CCTATCATCG CGCGGGACGG CCGGCCTAA
 
Protein sequence
MRLIAVGRMK DRVERDLFQR YAERLSPRLD LVEVAEGRGA PAEIKRREGQ ALLSALPDRA 
FAVALDEGGR AHDSLAFARV LERWLGLSRP VCFLVGGAEG LDGPVLARAD DTLSLGPMTW
PHMLIRGLLA EQLYRARAIA SGHPYHRAGR PA