| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbro_1956 |
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| Symbol | |
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| ID | 8551309 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gordonia bronchialis DSM 43247 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013441 |
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| Strand | - |
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| Start bp | 2063377 |
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| End bp | 2065377 |
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| Gene Length | 2001 bp |
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| Protein Length | 666 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | |
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| Product | alpha amylase catalytic region |
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| Protein accession | YP_003273103 |
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| Protein GI | 262201895 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0110526 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGATCGGGC GGATGGGTAT CGACGACATC CAACCCCTCG TCTCGGCCGG GCATCAGCCC
GCCAAAGCCG TTGTGGGCGA GTTTGTTCCG GTGAGCGCCA CGGCGTGGCG CGAGGGCCAC
GACGCGATCG GGGTGACCCT GCACGTGGAG ACGCCCCGGC GCGAGGTCGT CGACATCCCG
ATGTCGCCGT CGGTCGAGCC GGATGTGTTC AACGCCGCCT TCGTCCCCGA CGCCGTCGGG
TTCTGGACGT TCCGTATCGA GGCCTGGAGC GACCCCTACC GCACCTGGCG ATCGGGCATC
CTCAAGAAGA TCGACGCCGG TCAGGGTGCG GCGGATCTGA CCAACGAACT CGAGATCGGC
GCACGTCTGC TGACCGAGGC CGCCGGGCTC GTGCCCGACG ACGTCCGCGA ACTCGTCACC
GATGCCGTCC GCCTGCTGCG CTCGGCGCGC CGGCGGGTGG AGAACCGGGT GAGCCTGGCG
GTCTCCGACG AGATCGTCGA GTTGCTCGCC GCTCATCCGG TGCGCGAGCT GGTGACCAAG
AGCCGCACCT ACCGGGTCTG GGCGGATCGT CGGCGCGCCC TCGTCGGTTC CTGGTACGAG
CTGTTCCCGC GGTCCACCGG CGGCTGGGAC GGGGAGGGCA ATCCCGTGCA CGGCACCTTC
CTCACCGCGG CACAGGACCT CCCCCGCATC GCCGACATGG GATTCGACGT CGTCTACCTG
CCCCCGATCC ACCCGATCGG CAAGGTCAAT CGCAAGGGCC GCAACAACAC CCTGGTCGCC
GGGCCCGACG ACGTGGGGTC GCCGTGGGCC ATCGGCTCCG ACGAGGGCGG TCACGACGCG
ATCCATCCCG GCCTCGGCAG CGTCGAGGAC TTCGAGTACT TCGTCGCCCG GGCGCGCGAA
CTCGGCCTGG AGGTCGCGCT CGACCTCGCA CTGCAATGCG CGCCCGACCA TCCGTGGGCT
CTCGAGCATC CCGACTGGTT CACGGTGCTG CCCGACGGCA CGATTGCGTA CGCGGAGAAC
CCGCCGAAGA AATACCAGGA CATCTACCCG CTGAACTTCG ACAACGACCG CAACGGCATC
TACCACGCCG TGCTGAAGGT GGTGCTGCAC TGGGTGAAAC TCGGGGTGCA CATCTTCCGC
GTCGACAACC CGCACACCAA GCCGCCGAAC TTCTGGGAAT GGATCATCAC CGAGGTCAAG
AAGCGCAATC CGGATGTGCT GTTCCTCGCC GAGGCATTCA CCCGGCCGGC GCGGCTCTAC
GGTCTGGCGC GGCTCGGATT CACCCAGTCC TACACCTACT TCACCTGGAA GACCGAGAAG
TGGGAGATCG AGGAGTTCGG CCGGGAGATC GCCGAGCACG CCGACGAGGC CCGGCCCAAC
CTGTTCGTCA ACACCCCGGA CATCCTGCAC GCGAGCCTGC AGCACGGCGG GCCGGGGATG
TTCGCGTTGC GCGCCGCGCT GGCCGCGACT CTCGCACCGA CCTGGGGCGT CTACAGCGGC
TACGAACTCT ACGAGCACGT GGCCGTGCAC GAGGGCAGCG AAGAGTATCT GCACTCGGAG
AAGTACGAGT TGCGTCCCCG CGACTACAAG GCCGCCGCGA GTCGCGGTGA GTCGCTGGAA
CCGTGGATCA CCTCGCTCAA CGCGATCCGA CGACGCCACC CCGCGCTGCA GCAGCTGCGC
AACATCACCT TCCATCACCT CGACAACCCG GCGCTGATCG CCTACTCGAA ACTGGATCCG
GTGTCCGGCG ACCGTGTCAT CGTGGTGATC AACCTGAATC CGTTCGGCCC GGAGTCCTCG
ACCCTGTGGC TGGACATGCC CGCTCTCGGC TGCGACTGGC AGGATCGGTT CCCGGTGCGC
GACGAGGTGA CCGGAGAGGA GTTCTGGTGG GGACAGGCCA ATTACATCCG ACTCGAGCCC
TGGCGCGCCG TGGCCCATAT CGTCGCGCTG CCGCGTCTGG ATCCCGCGGC CGCACAGCGA
CTCTCCTACC GGATTCGATG A
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| Protein sequence | MIGRMGIDDI QPLVSAGHQP AKAVVGEFVP VSATAWREGH DAIGVTLHVE TPRREVVDIP
MSPSVEPDVF NAAFVPDAVG FWTFRIEAWS DPYRTWRSGI LKKIDAGQGA ADLTNELEIG
ARLLTEAAGL VPDDVRELVT DAVRLLRSAR RRVENRVSLA VSDEIVELLA AHPVRELVTK
SRTYRVWADR RRALVGSWYE LFPRSTGGWD GEGNPVHGTF LTAAQDLPRI ADMGFDVVYL
PPIHPIGKVN RKGRNNTLVA GPDDVGSPWA IGSDEGGHDA IHPGLGSVED FEYFVARARE
LGLEVALDLA LQCAPDHPWA LEHPDWFTVL PDGTIAYAEN PPKKYQDIYP LNFDNDRNGI
YHAVLKVVLH WVKLGVHIFR VDNPHTKPPN FWEWIITEVK KRNPDVLFLA EAFTRPARLY
GLARLGFTQS YTYFTWKTEK WEIEEFGREI AEHADEARPN LFVNTPDILH ASLQHGGPGM
FALRAALAAT LAPTWGVYSG YELYEHVAVH EGSEEYLHSE KYELRPRDYK AAASRGESLE
PWITSLNAIR RRHPALQQLR NITFHHLDNP ALIAYSKLDP VSGDRVIVVI NLNPFGPESS
TLWLDMPALG CDWQDRFPVR DEVTGEEFWW GQANYIRLEP WRAVAHIVAL PRLDPAAAQR
LSYRIR
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