Gene Gbem_3980 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_3980 
Symbol 
ID6780844 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand
Start bp4517020 
End bp4517871 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content50% 
IMG OID642769975 
Productaldo/keto reductase 
Protein accessionYP_002140768 
Protein GI197120341 
COG category[R] General function prediction only 
COG ID[COG0656] Aldo/keto reductases, related to diketogulonate reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.817607 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGAAAG TGACTTTAAA TAATGGTGTG GAGATGCCTA TTCTCGGTTT TGGCGTCTTC 
CAGGTCAGTG ATCCGAAGGA ATGTGAGCGT AGCGTCAGTG ATGCCCTGCA GGCGGGGTAC
CGATTGATTG ATACTGCGGC ATCCTACATG AATGAAATAG CTGTCGGCAA CGCAATAAGG
AATAGTGGCA TTGACCGGCA TGAAATCTTT GTGACCACCA AGCTGTGGGT CCAGGATGCG
GGTTACGATG GCACCCGGAA GGCGTTTGAT AAATCGCTGG CTAAGCTGCA ATTGGATTAT
CTGGATTTGT ATCTGATCCA TCAGCCGTAC GGAGATGTCT TCGGTTCCTG GCGGGCCATG
GAAAGTCTGC ATCGGGAAGG CAAAGTCCGA GCAATCGGCG TCAGCAATTT CCATCCGGAC
CGGATTATGG ATCTGATGAT TCACAGCGAA GTGGCGCCGG CGGTCAATCA GATAGAAACA
CACCCTTTCT GCCAACAGAT CGAGACTCAG CGGTTCCTTC AAGAAAACGG CGTTCAGATT
GAATCTTGGG GACCTTTTGC CGAGGGCAAG AATGATCTAT TCAGCAATGA ACTGCTCACT
GCCATTGGCC GCAAATATGA CAAATCTGTT GCTCAGGTGG TGTTGCGCTG GCTGACCCAA
AGAGGCGTCG TGGTCATACC GAAATCAGTG AACAAAGAGC GGATTGTTCA GAACTTCAAC
ATTTTTGACT TCGAACTCGC AGCCGAGGAT ATGGGGAGCA TTGCAACGCT GGATAAGAAA
GAAAGCAGCT TCTTCGATCA TCGCGATCCG GATATGGTGA AGTGGATTGG GACCCGTAAG
TTGGACCTCT AA
 
Protein sequence
MQKVTLNNGV EMPILGFGVF QVSDPKECER SVSDALQAGY RLIDTAASYM NEIAVGNAIR 
NSGIDRHEIF VTTKLWVQDA GYDGTRKAFD KSLAKLQLDY LDLYLIHQPY GDVFGSWRAM
ESLHREGKVR AIGVSNFHPD RIMDLMIHSE VAPAVNQIET HPFCQQIETQ RFLQENGVQI
ESWGPFAEGK NDLFSNELLT AIGRKYDKSV AQVVLRWLTQ RGVVVIPKSV NKERIVQNFN
IFDFELAAED MGSIATLDKK ESSFFDHRDP DMVKWIGTRK LDL